RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 HNRNPCP07910 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
COL9A1-203ENST00000360859 TBPP20226 339 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 RND2P52198 227 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 AP2S1P53680 142 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-203ENST00000360859 DHODHQ02127 395 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 PRSS54Q6PEW0 395 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 OR4D10Q8NGI6 311 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 Q8WTZ3 238 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 MTFP1Q9UDX5 166 aa12.5□□□□□ -0.41
COL9A1-203ENST00000360859 FAM90A26D6RGX4 464 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 B3GALNT1O75752 331 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 SLC25A4P12235 298 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 OR10J1P30954 320 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 RORCP51449 518 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 YPEL3P61236 119 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-203ENST00000360859 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-203ENST00000360859 SCGB2B2Q4G0G5 96 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 OR52E5Q8NH55 327 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 HEYLQ9NQ87 328 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-203ENST00000360859 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-203ENST00000360859 XCL2Q9UBD3 114 aa12.49□□□□□ -0.41
COL9A1-203ENST00000360859 H3BMM0 161 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 CDS2O95674 445 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 NUTF2P61970 127 aaKnown RBP12.48□□□□□ -0.41
COL9A1-203ENST00000360859 SNRPD3P62318 126 aaKnown RBP12.48□□□□□ -0.41
COL9A1-203ENST00000360859 C2orf83Q53S99 150 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 POM121L12Q8N7R1 296 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 LHFPL5Q8TAF8 219 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 MARCH1Q8TCQ1 289 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 RNASEH2CQ8TDP1 164 aaKnown RBP12.48□□□□□ -0.41
COL9A1-203ENST00000360859 ABHD1Q96SE0 405 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 SCRT1Q9BWW7 348 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 C1QTNF4Q9BXJ3 329 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 TMEM222Q9H0R3 208 aa12.48□□□□□ -0.41
COL9A1-203ENST00000360859 CD74P04233 296 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 IL4P05112 153 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 OR5AC1P0C628 307 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 P0DMU3 169 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 MZT2AQ6P582 158 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 TMEM229BQ8NBD8 167 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 SLC24A4Q8NFF2 622 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 TMEM170AQ8WVE7 144 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 NDUFAF3Q9BU61 184 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 SEPSECSQ9HD40 501 aaKnown RBP12.47□□□□□ -0.41
COL9A1-203ENST00000360859 NRN1Q9NPD7 142 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 EXTL2Q9UBQ6 330 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 CACNG5Q9UF02 275 aa12.47□□□□□ -0.41
COL9A1-203ENST00000360859 TNFAIP8O95379 198 aa12.46□□□□□ -0.41
COL9A1-203ENST00000360859 RAB3DO95716 219 aa12.46□□□□□ -0.41
COL9A1-203ENST00000360859 GLYATL2Q8WU03 294 aa12.46□□□□□ -0.41
COL9A1-203ENST00000360859 NPIPB3Q92617 1050 aa12.46□□□□□ -0.41
COL9A1-203ENST00000360859 GPR146Q96CH1 333 aa12.46□□□□□ -0.41
COL9A1-203ENST00000360859 FAT2Q9NYQ8 4349 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 TEX13DA0A0J9YY54 714 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-203ENST00000360859 M0R2N4 97 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 RTL8CO15255 209 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 BUB3O43684 328 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 NXPH3O95157 252 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 RD3LP0DJH9 198 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 NPY1RP25929 384 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 TAS2R19P59542 299 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 STEAP1BQ6NZ63 245 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 SELENOHQ8IZQ5 122 aaKnown RBP12.45□□□□□ -0.42
COL9A1-203ENST00000360859 AP3S1Q92572 193 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 RBPMSQ93062 196 aaKnown RBP12.45□□□□□ -0.42
COL9A1-203ENST00000360859 RTBDNQ9BSG5 229 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-203ENST00000360859 NAA60Q9H7X0 242 aa12.45□□□□□ -0.42
COL9A1-203ENST00000360859 PRSS29PA6NIE9 313 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 CEBPZOSA8MTT3 80 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 TOMM40O96008 361 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 HLA-DRB4P13762 266 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 MEF2DQ14814 521 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 ETFRF1Q6IPR1 90 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 ZNF705AQ6ZN79 300 aaPredicted RBP12.44□□□□□ -0.42
COL9A1-203ENST00000360859 ACY3Q96HD9 319 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 C14orf166Q9Y224 244 aaKnown RBP12.44□□□□□ -0.42
COL9A1-203ENST00000360859 HLA-DRB4X5D2U9 266 aa12.44□□□□□ -0.42
COL9A1-203ENST00000360859 PKHD1P08F94 4074 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 DNAH2Q9P225 4427 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 ZNF705FA8MVS1 300 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 GSTZ1O43708 216 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 ZNF705DP0CH99 300 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 ZNF705BP0CI00 300 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 MED14OSP0DP75 135 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 PSG1P11464 419 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 ZNF182P17025 639 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 NKX2-1P43699 371 aaPredicted RBP12.43□□□□□ -0.42
COL9A1-203ENST00000360859 TMEM268Q5VZI3 342 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 FAAP20Q6NZ36 180 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 C15orf40Q8WUR7 153 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 NEU1Q99519 415 aa12.43□□□□□ -0.42
COL9A1-203ENST00000360859 SPART-AS1P0CW21 52 aa12.42□□□□□ -0.42
COL9A1-203ENST00000360859 EMP1P54849 157 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms