RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PPP1R27Q86WC6 154 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 LYZL4Q96KX0 146 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 KLF12Q9Y4X4 402 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 TMEM42Q69YG0 159 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 MCRIP2Q9BUT9 160 aaKnown RBP11.16□□□□□ -0.62
CCDC144A-203ENST00000360495 CCL1P22362 96 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 ZNF497Q6ZNH5 498 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 YPEL1O60688 119 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 CDKN1AP38936 164 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 GLMPQ8WWB7 406 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 YPEL2Q96QA6 119 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 TSSC4Q9Y5U2 329 aaPredicted RBP11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 ATG2BQ96BY7 2078 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 SMAD7O15105 426 aaKnown RBP11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 Q6ZT83 130 aa11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
CCDC144A-203ENST00000360495 HEATR5BQ9P2D3 2071 aa11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 PTPRZ1P23471 2315 aaPredicted RBP11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 LINC01549A6NIU2 74 aa11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 MORN3Q6PF18 240 aaPredicted RBP11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 GATD1Q8NB37 220 aa11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 MAFAQ8NHW3 353 aaPredicted RBP11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.63
CCDC144A-203ENST00000360495 SCRT1Q9BWW7 348 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 DOCK1Q14185 1865 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 LINC01587Q99440 93 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 LY96Q9Y6Y9 160 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 IGHV3OR16-10A0A075B7F0 116 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 C9JAW5 83 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 GLRXP35754 106 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 FAM186AA6NE01 2351 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 FAM90A9PA6NNJ1 464 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 PSG7Q13046 419 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 ZC2HC1BQ5TFG8 222 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 RNF115Q9Y4L5 304 aa11.14□□□□□ -0.63
CCDC144A-203ENST00000360495 NRN1LQ496H8 165 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 MORN2Q502X0 79 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 PIKFYVEQ9Y2I7 2098 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 CECR9P0C854 216 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 PRB4P10163 310 aaPredicted RBP11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 LHFPL4Q7Z7J7 247 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 ITLN2Q8WWU7 325 aaPredicted RBP11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 FOXH1O75593 365 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 CRPP02741 224 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 ZNF138P52744 262 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 LINC00312Q9Y6C7 94 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 CHCHD2Q9Y6H1 151 aaPredicted RBP11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 TRAV8-3A0A0A6YYJ7 113 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 MLNRO43193 412 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 RFPL3SP0C7P2 107 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 LYZL1Q6UWQ5 148 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 C8orf46Q8TAG6 207 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 PLEKHB2Q96CS7 222 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 WBP1Q96G27 269 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 EFEMP2O95967 443 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 DUTP33316 252 aaKnown RBP11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 FAM90A1Q86YD7 464 aa11.13□□□□□ -0.63
CCDC144A-203ENST00000360495 ZNF318Q5VUA4 2279 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 LYPD3O95274 346 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 TOMM40O96008 361 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 MALP21145 153 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 S100A7L2Q5SY68 101 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 TMEM86BQ8N661 226 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 CACNA1IQ9P0X4 2223 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 LINC00158P58513 81 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 TGFBR3LH3BV60 316 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 RHOGP84095 191 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 CENPVQ7Z7K6 275 aaPredicted RBP11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 SLC25A45Q8N413 288 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 GAGE1Q13065 139 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 UNC13CQ8NB66 2214 aa11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 MDC1Q14676 2089 aaKnown RBP11.12□□□□□ -0.63
CCDC144A-203ENST00000360495 IQCF6A8MYZ5 107 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 NMSQ5H8A3 153 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 TRGV2A0A075B6R0 118 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 C9JQL5 133 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 TCRAP04437 139 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 GAGE2AQ6NT46 116 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 ATP6V0BQ99437 205 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 A0A1B0GUS0 222 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 Q0VG73 95 aa11.11□□□□□ -0.63
CCDC144A-203ENST00000360495 TNFRSF14Q92956 283 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 SVILO95425 2214 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 B9A039 149 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 C5orf67F2Z3F1 127 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 MST1LQ2TV78 715 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 STPG4Q8N801 248 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 PAPPA2Q9BXP8 1791 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 CCL3L1P16619 93 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 TMEM14EPQ6UXP3 125 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 SIGLEC12Q96PQ1 595 aa11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 IGKV2-40A0A087WW87 121 aaPredicted RBP11.1□□□□□ -0.63
CCDC144A-203ENST00000360495 C9orf118A6NHY6 69 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms