RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 HBBP68871 147 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 SRYQ05066 204 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 TBC1D28Q2M2D7 210 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 UFSP1Q6NVU6 142 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 RFESDQ8TAC1 157 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 ZNF835Q9Y2P0 537 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 SH2D7A6NKC9 451 aaPredicted RBP12.17□□□□□ -0.46
UBAP1-202ENST00000359544 OR1B1Q8NGR6 318 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 IDI2-AS1Q9NZ38 188 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
UBAP1-202ENST00000359544 SOX21Q9Y651 276 aaPredicted RBP12.17□□□□□ -0.46
UBAP1-202ENST00000359544 NDUFS8O00217 210 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 PROP1O75360 226 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 Q0VFX4 171 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 MRPL49Q13405 166 aaKnown RBP12.16□□□□□ -0.46
UBAP1-202ENST00000359544 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 MED12LQ86YW9 2145 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 AMMECR1Q9Y4X0 333 aaPredicted RBP12.16□□□□□ -0.46
UBAP1-202ENST00000359544 COX8AP10176 69 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 HTR1DP28221 377 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 UBE2L3P68036 154 aaKnown RBP12.16□□□□□ -0.46
UBAP1-202ENST00000359544 ZNF841Q6ZN19 808 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 SSX8Q7RTT4 187 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 FDCSPQ8NFU4 85 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 SLC25A33Q9BSK2 321 aa12.16□□□□□ -0.46
UBAP1-202ENST00000359544 BOKQ9UMX3 212 aaPredicted RBP12.16□□□□□ -0.46
UBAP1-202ENST00000359544 IGHV3-64DA0A0J9YX35 117 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 C15orf65H3BRN8 121 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 Q6ZR03 302 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 LINC00173Q6ZV60 143 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 LHFPL4Q7Z7J7 247 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 H1FXQ92522 213 aaKnown RBP12.15□□□□□ -0.46
UBAP1-202ENST00000359544 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 GNG12Q9UBI6 72 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 JPT1Q9UK76 154 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 A6NDN8 102 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 PEX7O00628 323 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 WNT9BO14905 357 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 LTC4SQ16873 150 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 MDP1Q86V88 176 aa12.15□□□□□ -0.46
UBAP1-202ENST00000359544 HCFC1P51610 2035 aa12.15□□□□□ -0.47
UBAP1-202ENST00000359544 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.14□□□□□ -0.47
UBAP1-202ENST00000359544 IQCF6A8MYZ5 107 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 H3BRM9 83 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 TMEM251Q8N6I4 163 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 TPRX1Q8N7U7 411 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 LINC00479Q96M42 142 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 C9orf118A6NHY6 69 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 APOA2P02652 100 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 TNFRSF14Q92956 283 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 OR51B2Q9Y5P1 312 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
UBAP1-202ENST00000359544 ZNF462Q96JM2 2506 aa12.14□□□□□ -0.47
UBAP1-202ENST00000359544 RPL39P5Q59GN2 51 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 PINLYPA6NC86 204 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 K7EP34 96 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 FOXA3P55318 350 aaPredicted RBP12.13□□□□□ -0.47
UBAP1-202ENST00000359544 ATP5IP56385 69 aaPredicted RBP12.13□□□□□ -0.47
UBAP1-202ENST00000359544 RBPJQ06330 500 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 C1orf185Q5T7R7 199 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 LINC01545Q5VT33 79 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 SLC25A2Q9BXI2 301 aa12.13□□□□□ -0.47
UBAP1-202ENST00000359544 PPIAL4DF5H284 164 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 CYB561P49447 251 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 ZNF329Q86UD4 541 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 C5orf17Q8NAS9 161 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 FNDC4Q9H6D8 234 aaPredicted RBP12.12□□□□□ -0.47
UBAP1-202ENST00000359544 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 CT83Q5H943 113 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 ASPHD1Q5U4P2 390 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 LINC00696Q6ZRV3 163 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 NEGR1Q7Z3B1 354 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 DDB2Q92466 427 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 FAM167A-AS1Q96KT0 104 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 C7orf69Q9H7B7 122 aa12.12□□□□□ -0.47
UBAP1-202ENST00000359544 IGKV1OR2-108A0A075B7D4 117 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 A8MWL6 223 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 ZNF826PQ6ZT77 177 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
UBAP1-202ENST00000359544 FAM90A1Q86YD7 464 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 RPP21Q9H633 154 aaKnown RBP12.11□□□□□ -0.47
UBAP1-202ENST00000359544 B4GALT7Q9UBV7 327 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 FREM1Q5H8C1 2179 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 VWC2LB2RUY7 222 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 CEACAM3P40198 252 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 ALKBH6Q3KRA9 238 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 OR5A1Q8NGJ0 315 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
UBAP1-202ENST00000359544 EDDM3AQ14507 147 aa12.1□□□□□ -0.47
UBAP1-202ENST00000359544 SAMD13Q5VXD3 122 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms