RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 ANKHD1Q8IWZ3 2542 aaKnown RBP10.1□□□□□ -0.79
COL20A1-201ENST00000358894 FABP2P12104 132 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 GCSHP23434 173 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 ZNF841Q6ZN19 808 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 LINC00312Q9Y6C7 94 aa10.1□□□□□ -0.79
COL20A1-201ENST00000358894 LYNX1G3V0Z9 82 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 HLA-DQA1P01909 254 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 LYNX1P0DP58 116 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 PSG1P11464 419 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 LMO1P25800 156 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 CEACAM3P40198 252 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 GPR6P46095 362 aaPredicted RBP10.09□□□□□ -0.79
COL20A1-201ENST00000358894 DUX4L9Q6RFH8 374 aaPredicted RBP10.09□□□□□ -0.79
COL20A1-201ENST00000358894 C19orf35Q6ZS72 473 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 PRNTQ86SH4 94 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 SNRNP40Q96DI7 357 aaKnown RBP10.09□□□□□ -0.79
COL20A1-201ENST00000358894 CDC42EP3Q9UKI2 254 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 TM4SF5O14894 197 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 WISP2O76076 250 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 Q6ZVH6 145 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 LINC00305Q7Z4B0 112 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 ARFGEF3Q5TH69 2177 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 STAG3L3P0CL85 134 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 SCGB1C2P0DMR2 95 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
COL20A1-201ENST00000358894 RPUSD1Q9UJJ7 312 aaKnown RBP10.09□□□□□ -0.79
COL20A1-201ENST00000358894 MLANAQ16655 118 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 LHFPL4Q7Z7J7 247 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 HIGD1AQ9Y241 93 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 PPIAL4CA0A0B4J2A2 164 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 ZNF785A8K8V0 405 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 FOXH1O75593 365 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 PPIAL4GP0DN37 164 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 OCIAD2Q56VL3 154 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 HSPB8Q9UJY1 196 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 S4R3C0 116 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 OR4C46A6NHA9 309 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 IGKV1-16P04430 117 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 PYYP10082 97 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 TIMP3P35625 211 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
COL20A1-201ENST00000358894 FNDC4Q9H6D8 234 aaPredicted RBP10.08□□□□□ -0.8
COL20A1-201ENST00000358894 WT1P19544 449 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 FBXL15Q9H469 300 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 CST9LQ9H4G1 147 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 CORTO00230 105 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MAS1LP35410 378 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 PNKDQ8N490 385 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 AGMATQ9BSE5 352 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 TLN1Q9Y490 2541 aaKnown RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 TRAV5A0A0B4J249 113 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 CLEC3BP05452 202 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 PRB4P10163 310 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 PRCDQ00LT1 54 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 COX11Q9Y6N1 276 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 TRAV30A0A087WSZ9 112 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 IGHV3-35A0A0C4DH35 117 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MBD3L4A6NDZ8 208 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MBD3L3A6NE82 208 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MBD3L5A6NJ08 208 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 CA1P00915 261 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 OR52E5Q8NH55 327 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MBD3L2Q8NHZ7 208 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 EAF1Q96JC9 268 aaPredicted RBP10.07□□□□□ -0.8
COL20A1-201ENST00000358894 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
COL20A1-201ENST00000358894 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
COL20A1-201ENST00000358894 C20orf144Q9BQM9 153 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 THYN1Q9P016 225 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 CDKN1BP46527 198 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 CD69Q07108 199 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 TMEM30BQ3MIR4 351 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 TMEM177Q53S58 311 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 C19orf24Q9BVV8 132 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 LGALS7P47929 136 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 ZNF134P52741 427 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 PGLYRP4Q96LB8 373 aa10.06□□□□□ -0.8
COL20A1-201ENST00000358894 GAGE12BA1L429 117 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 A8MWL6 223 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 C11orf53Q8IXP5 236 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 SSBP4Q9BWG4 385 aaPredicted RBP10.05□□□□□ -0.8
COL20A1-201ENST00000358894 CLEC7AQ9BXN2 247 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 MRPL32Q9BYC8 188 aaKnown RBP10.05□□□□□ -0.8
COL20A1-201ENST00000358894 SPRY4Q9C004 299 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 H3BUT2 72 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 CDKN1AP38936 164 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 MEF2CQ06413 473 aaPredicted RBP10.05□□□□□ -0.8
COL20A1-201ENST00000358894 TMEM70Q9BUB7 260 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 ELOVL5Q9NYP7 299 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 PLA2G5P39877 138 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 GNG5P63218 68 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 STPG4Q8N801 248 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 GTSF1LQ9H1H1 148 aa10.05□□□□□ -0.8
COL20A1-201ENST00000358894 FAM90A9PA6NNJ1 464 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 CD24P25063 80 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 GAFA1Q96PS6 74 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 CLEC5AQ9NY25 188 aa10.04□□□□□ -0.8
COL20A1-201ENST00000358894 XIRP2A4UGR9 3374 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms