RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 DPRXA6NFQ7 191 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 H3BUX3 64 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 ATP6V0BQ99437 205 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 CMC4P56277 68 aaPredicted RBP8.16□□□□□ -1.1
CHD3-202ENST00000358181 GAGE6Q13070 117 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 ACP7Q6ZNF0 438 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 STPG2Q8N412 459 aa8.16□□□□□ -1.1
CHD3-202ENST00000358181 PQLC2LA1A4F0 135 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 FOXL1Q12952 345 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 VWC2Q2TAL6 325 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 RMI2Q96E14 147 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 IFI27L2Q9H2X8 130 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 SCRT2Q9NQ03 307 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 C1QAP02745 245 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 CELA3BP08861 270 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 GAGE7O76087 117 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 PRSS23O95084 383 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 SEC11AP67812 179 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 RBM38Q9H0Z9 239 aaKnown RBP8.15□□□□□ -1.1
CHD3-202ENST00000358181 MBNL3Q9NUK0 354 aaKnown RBP8.15□□□□□ -1.1
CHD3-202ENST00000358181 SURF2Q15527 256 aaPredicted RBP8.15□□□□□ -1.1
CHD3-202ENST00000358181 C2orf82Q6UX34 121 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 SPACA3Q8IXA5 215 aa8.15□□□□□ -1.1
CHD3-202ENST00000358181 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 C4orf51C9J302 202 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 DPM2O94777 84 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 IGKCP01834 107 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 C8orf31Q8N9H6 132 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 PRSS29PA6NIE9 313 aa8.15□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A18PA6NE21 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A16PA6NEW6 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A9PA6NNJ1 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A5PA8MXJ8 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A15PP0C7V4 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A14PP0C7W9 464 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 COX6A1P12074 109 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 CSRP2Q16527 193 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 NAA38Q9BRA0 125 aaKnown RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 TGFBR3LH3BV60 316 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 GATAD1Q8WUU5 269 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 RGPD3A6NKT7 1758 aaPredicted RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 KIF13BQ9NQT8 1826 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 A8MXK9 166 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 CECR9P0C854 216 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 ADMP35318 185 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 GZMMP51124 257 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 MARF1Q9Y4F3 1742 aaKnown RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 C15orf61A6NNL5 157 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 A8MWV9 139 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 RUSC1-AS1Q66K80 236 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 UNQ6494/PRO21346Q6UXR6 183 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 TMEM222Q9H0R3 208 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 RAMP1O60894 148 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 UBE2E1P51965 193 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 SYNJ2BPP57105 145 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 ZNF345Q14585 488 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 DMRTC2Q8IXT2 367 aaPredicted RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 SRRM4A7MD48 611 aaKnown RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 MRPL52Q86TS9 123 aaKnown RBP8.14□□□□□ -1.11
CHD3-202ENST00000358181 PRIMA1Q86XR5 153 aa8.14□□□□□ -1.11
CHD3-202ENST00000358181 TIMM23O14925 209 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 CEACAM1P13688 526 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 TIMM23BQ5SRD1 257 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 GPHB5Q86YW7 130 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 CITED1Q99966 193 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 DUTP33316 252 aaKnown RBP8.13□□□□□ -1.11
CHD3-202ENST00000358181 MRPL14Q6P1L8 145 aaKnown RBP8.13□□□□□ -1.11
CHD3-202ENST00000358181 C9orf62Q8N4C0 152 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 RNASE7Q9H1E1 156 aaKnown RBP8.13□□□□□ -1.11
CHD3-202ENST00000358181 TRAV5A0A0B4J249 113 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A7PA6NKC0 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 HIGD1CA8MV81 97 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A22PA8MWA6 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A12PA8MX19 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A23PA8MXZ1 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 RS1O15537 224 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 DSCR9P59020 149 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 RASL11AQ6T310 242 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 DNAJC30Q96LL9 226 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 COL5A3P25940 1745 aaPredicted RBP8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A10PA6NDY2 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A8PA6NJQ4 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A13PP0C7W8 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM90A24PP0C7X0 464 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 APOC4P55056 127 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 ESPL1Q14674 2120 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 FAM27BQ5VT28 67 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 ATP5L2Q7Z4Y8 100 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 HIST1H2BAQ96A08 127 aa8.13□□□□□ -1.11
CHD3-202ENST00000358181 PLXNA1Q9UIW2 1896 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms