RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C19orf35Q6ZS72 473 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 S100A7AQ86SG5 101 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 OR8B3Q8NGG8 313 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 Q8TCH9 128 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 SRSF12Q8WXF0 261 aaKnown RBP5.59□□□□□ -1.52
RTN4-203ENST00000357376 HIF1ANQ9NWT6 349 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 LINC00312Q9Y6C7 94 aa5.59□□□□□ -1.52
RTN4-203ENST00000357376 CEP192Q8TEP8 1941 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 SNAI2O43623 268 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 GPX1P07203 203 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 C3orf79P0CE67 100 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 HBBP68871 147 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 BSPH1Q075Z2 132 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 COA6Q5JTJ3 125 aaKnown RBP5.58□□□□□ -1.52
RTN4-203ENST00000357376 GRAMD2BQ96HH9 432 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 FBXL15Q9H469 300 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 GSX1Q9H4S2 264 aaPredicted RBP5.58□□□□□ -1.52
RTN4-203ENST00000357376 LAMTOR2Q9Y2Q5 125 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 IGHV3-35A0A0C4DH35 117 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 IGHG3P01860 377 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
RTN4-203ENST00000357376 MC5RP33032 325 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 C17orf58Q2M2W7 97 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 VWC2Q2TAL6 325 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 UTF1Q5T230 341 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 NUDT10Q8NFP7 164 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 CACNG8Q8WXS5 425 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 TMEM186Q96B77 213 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 NUDT11Q96G61 164 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 TMEM14BQ9NUH8 114 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.58□□□□□ -1.52
RTN4-203ENST00000357376 BMPR1BO00238 502 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 TM4SF5O14894 197 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 DLX1P56177 255 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 LOXL3P58215 753 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 ZNF738Q8NE65 137 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 RBM14Q96PK6 669 aaKnown RBP5.58□□□□□ -1.52
RTN4-203ENST00000357376 GAFA1Q96PS6 74 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 TMEM208Q9BTX3 173 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 V9GYV3 84 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 MALRD1Q5VYJ5 2156 aa5.58□□□□□ -1.52
RTN4-203ENST00000357376 OR4C46A6NHA9 309 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 SRRM4A7MD48 611 aaKnown RBP5.57□□□□□ -1.52
RTN4-203ENST00000357376 C17orf100A8MU93 164 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 LYNX1G3V0Z9 82 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 PROP1O75360 226 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 FAM87AP0C7U9 286 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 LYNX1P0DP58 116 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 RNASE2P10153 161 aaKnown RBP5.57□□□□□ -1.52
RTN4-203ENST00000357376 CA7P43166 264 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 PPOXP50336 477 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 YPEL3P61236 119 aaPredicted RBP5.57□□□□□ -1.52
RTN4-203ENST00000357376 C2orf83Q53S99 150 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 TIMD4Q96H15 378 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 RCHY1Q96PM5 261 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 TMEM70Q9BUB7 260 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 ZGRF1Q86YA3 2104 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 ATG2AQ2TAZ0 1938 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 TCRBV4S1A1TA0A5B7 111 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 CD3EP07766 207 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 WNT2P09544 360 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 CD24P25063 80 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 MUC15Q8N387 334 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 DIRC2Q96SL1 478 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 ASCL2Q99929 193 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 ZNF257Q9Y2Q1 563 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 IGHV3OR16-8A0A075B7F1 116 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 TRAV8-1A0A0A6YYK1 113 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 A0A1W2PS18 150 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 DLEU1O43261 78 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 FCGR2BP31994 310 aaPredicted RBP5.57□□□□□ -1.52
RTN4-203ENST00000357376 OR10J3Q5JRS4 329 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 NUP35Q8NFH5 326 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 GPR82Q96P67 336 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 MCRIP2Q9BUT9 160 aaKnown RBP5.57□□□□□ -1.52
RTN4-203ENST00000357376 Q9H3A6 140 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 EPDR1Q9UM22 224 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 EXPH5Q8NEV8 1989 aa5.57□□□□□ -1.52
RTN4-203ENST00000357376 UQCRFS1P47985 274 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 FOXC1Q12948 553 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 RIGQ13278 110 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 ASCL5Q7RTU5 278 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 C5orf17Q8NAS9 161 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 RPP21Q9H633 154 aaKnown RBP5.56□□□□□ -1.52
RTN4-203ENST00000357376 CORTO00230 105 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 P0C879 139 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 ATP5IP56385 69 aaPredicted RBP5.56□□□□□ -1.52
RTN4-203ENST00000357376 SLAQ13239 276 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 TMEM200BQ69YZ2 307 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 SLC25A48Q6ZT89 311 aaKnown RBP5.56□□□□□ -1.52
RTN4-203ENST00000357376 NEUROG1Q92886 237 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 LPAR2Q9HBW0 351 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 COL5A1P20908 1838 aaPredicted RBP5.56□□□□□ -1.52
RTN4-203ENST00000357376 SH2D7A6NKC9 451 aaPredicted RBP5.56□□□□□ -1.52
RTN4-203ENST00000357376 ZNF785A8K8V0 405 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 H0YJW9 148 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 IL4P05112 153 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 NPSP0C0P6 89 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 TDGF1P13385 188 aa5.56□□□□□ -1.52
RTN4-203ENST00000357376 ARL3P36405 182 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms