RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 HES4Q9HCC6 221 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNRD1Q9P1U0 126 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 CLCF1Q9UBD9 225 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 TSSC4Q9Y5U2 329 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 C2orf70A6NJV1 201 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 C15orf65H3BRN8 121 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPRY3O43610 288 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 CECR9P0C854 216 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 HTR1DP28221 377 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 UQCRFS1P47985 274 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 CX3CL1P78423 397 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 SHISA2Q6UWI4 295 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 C1orf229Q6ZS94 237 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 PERPQ96FX8 193 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 IGKV1D-17A0A075B6S4 117 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPAARA0A1B0GVQ0 90 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 J3QR89 54 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 TECTAO75443 2155 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 HLA-DRB1P01911 266 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 APCSP02743 223 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 RNASEKQ6P5S7 137 aaKnown RBP6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 DHRS13Q6UX07 377 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 MOGAT3Q86VF5 341 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR2T6Q8NHC8 308 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 C18orf32Q8TCD1 76 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF331Q9NQX6 463 aaPredicted RBP6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 ZNF355PQ9NSJ1 428 aa6.74□□□□□ -1.33
CDC42SE1-201ENST00000357235 CNOT1A5YKK6 2376 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 EP300Q09472 2414 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TNRC6BQ9UPQ9 1833 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TRAV5A0A0B4J249 113 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 A0A1W2PNU3 283 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 A6NDN8 102 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 PLAUP00749 431 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 FTH1P19P0C7X4 201 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 SAA2P0DJI9 122 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 MEF2CQ06413 473 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 CCDC144NLQ6NUI1 221 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 FAM214BQ7L5A3 538 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPATA12Q7Z6I5 190 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 WDR31Q8NA23 367 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 OR9G1Q8NH87 305 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 JMJD8Q96S16 334 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 NAA38Q9BRA0 125 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 ARRDC1-AS1Q9H2J1 176 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 IFI27L2Q9H2X8 130 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPCS1Q9Y6A9 102 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 PLCE1Q9P212 2302 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TET2Q6N021 2002 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TRGV10A0A0A0MS01 117 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 PSMB11A5LHX3 300 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 H3BRM9 83 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 F2RL2O00254 374 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 AMY1AP04745 511 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 MFAP2P55001 183 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 HSPE1P61604 102 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TRIP6Q15654 476 aaKnown RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 SPRNQ5BIV9 151 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 INO80CQ6PI98 192 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 DUX4L9Q6RFH8 374 aaPredicted RBP6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 FAM168AQ92567 244 aa6.73□□□□□ -1.33
CDC42SE1-201ENST00000357235 INTS1Q8N201 2190 aaKnown RBP6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 A0A0G2JLM5 398 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 C15orf61A6NNL5 157 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 GGTLC3B5MD39 225 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 PRSS46E5RG02 174 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 HIST1H1EP10412 219 aaKnown RBP6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 TRAT1Q6PIZ9 186 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 BPIFA4PQ86YQ2 179 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 VSTM2AQ8TAG5 236 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 PPP1R35Q8TAP8 253 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 BLNKQ8WV28 456 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM191AQ9H0A3 160 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 CALYQ9NYX4 217 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 JPT1Q9UK76 154 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 PKDREJQ9NTG1 2253 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 C9JCJ5 164 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 H0Y8G0 127 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 IGKV1-16P04430 117 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 CCL11P51671 97 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 UBE2L3P68036 154 aaKnown RBP6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 Q6ZT83 130 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 KIR3DL3Q8N743 410 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 FER1L6-AS2Q96M78 137 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM167BQ9NRX6 74 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 TECRQ9NZ01 308 aaKnown RBP6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 POLEQ07864 2286 aa6.72□□□□□ -1.33
CDC42SE1-201ENST00000357235 IGKV1OR2-108A0A075B7D4 117 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 PCNX2A6NKB5 2137 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 MGST3O14880 152 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 ACP1P24666 158 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 REG1BP48304 166 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM249Q2WGJ8 235 aa6.71□□□□□ -1.33
CDC42SE1-201ENST00000357235 TMEM177Q53S58 311 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms