RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 CACNA1DQ01668 2161 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 PYYP10082 97 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
COLCA1-201ENST00000355430 SNRPD3P62318 126 aaKnown RBP10.15□□□□□ -0.78
COLCA1-201ENST00000355430 SEPSECSQ9HD40 501 aaKnown RBP10.15□□□□□ -0.78
COLCA1-201ENST00000355430 FAM90A9PA6NNJ1 464 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 CD177Q8N6Q3 437 aa10.15□□□□□ -0.78
COLCA1-201ENST00000355430 OR4C46A6NHA9 309 aa10.15□□□□□ -0.79
COLCA1-201ENST00000355430 HLA-DRB1P01911 266 aa10.15□□□□□ -0.79
COLCA1-201ENST00000355430 GNB1LQ9BYB4 327 aa10.15□□□□□ -0.79
COLCA1-201ENST00000355430 OSTCQ9NRP0 149 aa10.15□□□□□ -0.79
COLCA1-201ENST00000355430 C15orf62A8K5M9 175 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 HIGD1CA8MV81 97 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 COQ2Q96H96 371 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 NPPCP23582 126 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 IGKV1-39P01597 117 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 IGKV1D-39P04432 117 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 CKS2P33552 79 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 PCP4P48539 62 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 C1orf194Q5T5A4 169 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 Q96MF0 132 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 TRAV5A0A0B4J249 113 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
COLCA1-201ENST00000355430 GATA3P23771 443 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 OR52E5Q8NH55 327 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 RPP21Q9H633 154 aaKnown RBP10.14□□□□□ -0.79
COLCA1-201ENST00000355430 DOCK8Q8NF50 2099 aa10.14□□□□□ -0.79
COLCA1-201ENST00000355430 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 SELLP14151 372 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 FAM169BQ8N8A8 192 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 CCL3L1P16619 93 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 CD33P20138 364 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 TSPOP30536 169 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 DGAT2L7PQ6IED9 249 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 ZNF474Q6S9Z5 364 aaPredicted RBP10.13□□□□□ -0.79
COLCA1-201ENST00000355430 TMEM133Q9H2Q1 129 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 LAMTOR2Q9Y2Q5 125 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 GAGE10A6NGK3 116 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 OR2T8A6NH00 312 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 WNT2P09544 360 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 MYOD1P15172 320 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 PET117Q6UWS5 81 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 IGHV3OR16-12A0A075B7B8 117 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 TNFSF13O75888 250 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 PFN1P07737 140 aaKnown RBP10.13□□□□□ -0.79
COLCA1-201ENST00000355430 PRCDQ00LT1 54 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 TCF24Q7RTU0 167 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 OR10W1Q8NGF6 305 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 CACNG8Q8WXS5 425 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 ARPC1AQ92747 370 aa10.13□□□□□ -0.79
COLCA1-201ENST00000355430 A0A1B0GUS0 222 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 NSUN5P1Q3KNT7 163 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 OR10J3Q5JRS4 329 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 DNLZQ5SXM8 178 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 OR10AG1Q8NH19 301 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 ZNF503-AS2A6NEH8 195 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 ERASQ7Z444 233 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 C2orf88Q9BSF0 95 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 KIAA2026Q5HYC2 2103 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 PRR31Q5SQ13 230 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 RAB37Q96AX2 223 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 EREGO14944 169 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 CDPF1Q6NVV7 123 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 PRB1P04280 392 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
COLCA1-201ENST00000355430 LHFPL4Q7Z7J7 247 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 FBXL15Q9H469 300 aa10.12□□□□□ -0.79
COLCA1-201ENST00000355430 A0A1W2PRE2 83 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 HAPLN4Q86UW8 402 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 BEND2Q8NDZ0 799 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 RNASEH2CQ8TDP1 164 aaKnown RBP10.11□□□□□ -0.79
COLCA1-201ENST00000355430 SNAI2O43623 268 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 CD69Q07108 199 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 SMAGPQ0VAQ4 97 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 MYOZ3Q8TDC0 251 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 FMC1Q96HJ9 113 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 Q9H3A6 140 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 PRDM13Q9H4Q3 707 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 S4R3C0 116 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 MLNRO43193 412 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 BEX4Q9NWD9 120 aaPredicted RBP10.11□□□□□ -0.79
COLCA1-201ENST00000355430 FOXA2Q9Y261 457 aaPredicted RBP10.11□□□□□ -0.79
COLCA1-201ENST00000355430 A8MWP6 167 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 K7ERU9 68 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 TNFRSF14Q92956 283 aa10.11□□□□□ -0.79
COLCA1-201ENST00000355430 CEACAM8P31997 349 aaPredicted RBP10.1□□□□□ -0.79
COLCA1-201ENST00000355430 PRB3Q04118 309 aaPredicted RBP10.1□□□□□ -0.79
COLCA1-201ENST00000355430 F11RQ9Y624 299 aaKnown RBP10.1□□□□□ -0.79
COLCA1-201ENST00000355430 LTBP2Q14767 1821 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 APOHP02749 345 aaPredicted RBP10.1□□□□□ -0.79
COLCA1-201ENST00000355430 IL4P05112 153 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 C2orf16Q68DN1 1984 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 SRRM5B3KS81 715 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 C9JCJ5 164 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 TMEM178BH3BS89 294 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 NBR2O15453 112 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 MGPP08493 103 aa10.1□□□□□ -0.79
COLCA1-201ENST00000355430 SCGB1C2P0DMR2 95 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms