RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 WIPF2Q8TF74 440 aaPredicted RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 TRGV9Q99603 122 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SIRT4Q9Y6E7 314 aaPredicted RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 ZIC3O60481 467 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 REG1BP48304 166 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 SMAD2Q15796 467 aaKnown RBP6.77□□□□□ -1.33
HTT-201ENST00000355072 LINC00696Q6ZRV3 163 aa6.77□□□□□ -1.33
HTT-201ENST00000355072 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 SCARF2Q96GP6 870 aaPredicted RBP6.76□□□□□ -1.33
HTT-201ENST00000355072 TRAV24A0A0B4J272 114 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 TEX43Q6ZNM6 134 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 KLF2Q9Y5W3 355 aaPredicted RBP6.76□□□□□ -1.33
HTT-201ENST00000355072 GFRA3O60609 400 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 PRKNO60260 465 aaPredicted RBP6.76□□□□□ -1.33
HTT-201ENST00000355072 PTGER1P34995 402 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 LINC00114Q6XXX2 140 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 CFHR5Q9BXR6 569 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 DUSP14O95147 198 aaKnown RBP6.76□□□□□ -1.33
HTT-201ENST00000355072 CLEC2AQ6UVW9 174 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 PCSK4Q6UW60 755 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 CXorf67Q86X51 503 aaPredicted RBP6.76□□□□□ -1.33
HTT-201ENST00000355072 RNF186Q9NXI6 227 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 ZNF497Q6ZNH5 498 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 TMEM54Q969K7 222 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 CSTL1Q9H114 145 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 PEMTQ9UBM1 199 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 TMEM42Q69YG0 159 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 H3BMG7 143 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 SPRY3O43610 288 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 FAM231DQ6ZW35 169 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 MYO9AB2RTY4 2548 aa6.76□□□□□ -1.33
HTT-201ENST00000355072 SMAD7O15105 426 aaKnown RBP6.75□□□□□ -1.33
HTT-201ENST00000355072 BADQ92934 168 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 IGHV2OR16-5A0A0B4J2B6 119 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 TIAF1O95411 115 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 C3AR1Q16581 482 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 SLC25A53Q5H9E4 307 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 ADMP35318 185 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 GFERP55789 205 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 ZIC4Q8N9L1 334 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 RNF125Q96EQ8 232 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 ATOX1O00244 68 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 FOXG1P55316 489 aaPredicted RBP6.75□□□□□ -1.33
HTT-201ENST00000355072 EFNB3Q15768 340 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 RNF152Q8N8N0 203 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 CGAP01215 116 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 RBMY1FQ15415 496 aaKnown RBP6.75□□□□□ -1.33
HTT-201ENST00000355072 RPS27P42677 84 aaKnown RBP6.75□□□□□ -1.33
HTT-201ENST00000355072 PPP1R27Q86WC6 154 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 SCO2A0A1W2PP80 73 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 NPC2P61916 151 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 C8orf44Q96CB5 159 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 BVES-AS1Q5T3Y7 98 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 NRTNQ99748 197 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 IGHV2-26A0A0B4J1V2 119 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 ZNF525Q8N782 197 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 RNF126Q9BV68 326 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 PILRAQ9UKJ1 303 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 ID3Q02535 119 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 GCSAMLQ5JQS6 135 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 MS4A4AQ96JQ5 239 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 WFDC1Q9HC57 220 aa6.75□□□□□ -1.33
HTT-201ENST00000355072 F8WEM9 126 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 LY6G6FQ5SQ64 297 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 BEX4Q9NWD9 120 aaPredicted RBP6.74□□□□□ -1.33
HTT-201ENST00000355072 IGHV5-51A0A0C4DH38 117 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 GAGE5Q13069 117 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 GAGE6Q13070 117 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 MESP1Q9BRJ9 268 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 ACP7Q6ZNF0 438 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 A0A1W2PPV9 198 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 RFESDQ8TAC1 157 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 A0A1W2PPE3 182 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 REG4Q9BYZ8 158 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 PRR32B1ATL7 298 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 Q5BKY6 102 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 IGLV3-32A0A0A0MS00 114 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 IGHV3-15A0A0B4J1V0 119 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 TOMM40O96008 361 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 ZNF83P51522 516 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 VKORC1Q9BQB6 163 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 PILRBQ9UKJ0 227 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 A0A1W2PPM0 123 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 EIF4EBP2Q13542 120 aaPredicted RBP6.74□□□□□ -1.33
HTT-201ENST00000355072 ECSCRQ19T08 205 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 SPINK9Q5DT21 86 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 TEX45Q8NA69 505 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 MRPL20Q9BYC9 149 aaKnown RBP6.74□□□□□ -1.33
HTT-201ENST00000355072 C21orf62Q9NYP8 219 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 IDI2-AS1Q9NZ38 188 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 TCTEX1D4Q5JR98 221 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 IFI27L2Q9H2X8 130 aa6.74□□□□□ -1.33
HTT-201ENST00000355072 LOC105371242A0A075B767 164 aa6.73□□□□□ -1.33
HTT-201ENST00000355072 PPIAL4CA0A0B4J2A2 164 aa6.73□□□□□ -1.33
HTT-201ENST00000355072 IGHV2-70DA0A0C4DH43 119 aa6.73□□□□□ -1.33
HTT-201ENST00000355072 H0Y8X5 98 aa6.73□□□□□ -1.33
HTT-201ENST00000355072 FOXH1O75593 365 aa6.73□□□□□ -1.33
HTT-201ENST00000355072 RNF224P0DH78 156 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms