RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 BET1LQ9NYM9 111 aa13.38□□□□□ -0.27
PDAP1-201ENST00000350498 ZNF835Q9Y2P0 537 aa13.38□□□□□ -0.27
PDAP1-201ENST00000350498 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
PDAP1-201ENST00000350498 RPL8P62917 257 aaKnown RBP13.37□□□□□ -0.27
PDAP1-201ENST00000350498 TEX43Q6ZNM6 134 aa13.37□□□□□ -0.27
PDAP1-201ENST00000350498 TBL2Q9Y4P3 447 aaKnown RBP13.37□□□□□ -0.27
PDAP1-201ENST00000350498 IGLV2-23P01705 113 aa13.37□□□□□ -0.27
PDAP1-201ENST00000350498 SRIP30626 198 aa13.37□□□□□ -0.27
PDAP1-201ENST00000350498 Q8N976 141 aa13.37□□□□□ -0.27
PDAP1-201ENST00000350498 NCOR2Q9Y618 2525 aa13.37□□□□□ -0.27
PDAP1-201ENST00000350498 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.36□□□□□ -0.27
PDAP1-201ENST00000350498 DLX6P56179 175 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 CX3CL1P78423 397 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 TECRQ9NZ01 308 aaKnown RBP13.36□□□□□ -0.27
PDAP1-201ENST00000350498 SPTBN1Q01082 2364 aaKnown RBP13.36□□□□□ -0.27
PDAP1-201ENST00000350498 FAM90A27PA6NNH2 459 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 APOA2P02652 100 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 GPX1P07203 203 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 TFPI2P48307 235 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 PAFAH1B2P68402 229 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 CD69Q07108 199 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 MRGPRG-AS1Q2M3A8 158 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 C2orf83Q53S99 150 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 LRRC10Q5BKY1 277 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
PDAP1-201ENST00000350498 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 ST6GALNAC6Q969X2 333 aa13.36□□□□□ -0.27
PDAP1-201ENST00000350498 BMPR1BO00238 502 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 SIAH2O43255 324 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 AMTP48728 403 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 MEF2CQ06413 473 aaPredicted RBP13.35□□□□□ -0.27
PDAP1-201ENST00000350498 TIGITQ495A1 244 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 ATOH7Q8N100 152 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 SLC25A33Q9BSK2 321 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 VAMP8Q9BV40 100 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 SLC25A2Q9BXI2 301 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 A0A1W2PS18 150 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 ZNF253O75346 499 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 PRB4P10163 310 aaPredicted RBP13.35□□□□□ -0.27
PDAP1-201ENST00000350498 ESDP10768 282 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
PDAP1-201ENST00000350498 SLAQ13239 276 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 SIGLECL1Q8N7X8 197 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 OSR1Q8TAX0 266 aaPredicted RBP13.35□□□□□ -0.27
PDAP1-201ENST00000350498 NPIPB3Q92617 1050 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 FAM167A-AS1Q96KT0 104 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 IGF2BP2-AS1Q96M15 143 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 GNB1LQ9BYB4 327 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 WNT10AQ9GZT5 417 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 TMEM167BQ9NRX6 74 aa13.35□□□□□ -0.27
PDAP1-201ENST00000350498 VPS13CQ709C8 3753 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 Q0VG73 95 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 TMEM177Q53S58 311 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 PRR27Q6MZM9 219 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 OR5B3Q8NH48 314 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 NRN1Q9NPD7 142 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 AKAP6Q13023 2319 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 OR5G3P0C626 314 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 UBE2L3P68036 154 aaKnown RBP13.34□□□□□ -0.27
PDAP1-201ENST00000350498 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 GSX1Q9H4S2 264 aaPredicted RBP13.34□□□□□ -0.27
PDAP1-201ENST00000350498 ZNF355PQ9NSJ1 428 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 CDC42EP3Q9UKI2 254 aa13.34□□□□□ -0.27
PDAP1-201ENST00000350498 IGHV1-69-2A0A0G2JMI3 117 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 IGHV1-8P0DP01 117 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 GNG5P63218 68 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 OR1L8Q8NGR8 309 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 MIEN1Q9BRT3 115 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 SSUH2Q9Y2M2 353 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 LY96Q9Y6Y9 160 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 A0A1W2PPI3 338 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 K7ENP7 123 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 NPSP0C0P6 89 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 NTF3P20783 257 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 GPR6P46095 362 aaPredicted RBP13.33□□□□□ -0.28
PDAP1-201ENST00000350498 TMEM155Q4W5P6 130 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 PATE2Q6UY27 113 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 OR4C13Q8NGP0 309 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 CHODLQ9H9P2 273 aa13.33□□□□□ -0.28
PDAP1-201ENST00000350498 PSMB11A5LHX3 300 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 CORTO00230 105 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 MOSP00540 346 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 PPOXP50336 477 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 MFAP2P55001 183 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 GDF5OSQ5U4N7 250 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 C20orf144Q9BQM9 153 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 SSBP4Q9BWG4 385 aaPredicted RBP13.32□□□□□ -0.28
PDAP1-201ENST00000350498 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 A0A1W2PN81 502 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 H3BTX0 84 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 CD24P25063 80 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 BRS3P32247 399 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 TMEM183BQ1AE95 376 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 LCN12Q6JVE5 192 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 SLC35E1Q96K37 410 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 OSTCQ9NRP0 149 aa13.32□□□□□ -0.28
PDAP1-201ENST00000350498 COX7A1P24310 79 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms