RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TM2D3Q9BRN9 247 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 PFDN2Q9UHV9 154 aa11.83□□□□□ -0.52
TSPAN4-201ENST00000346501 IGHV3-49A0A0A0MS15 119 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 DNASE2O00115 360 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 LYRM1O43325 122 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 MLANAQ16655 118 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 GGNBP1Q5YKI7 109 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 PRSS54Q6PEW0 395 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 RNF2Q99496 336 aa11.82□□□□□ -0.52
TSPAN4-201ENST00000346501 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 SYNGR2O43760 224 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 PITX3O75364 302 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 GPX4P36969 197 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 YPEL3P61236 119 aaPredicted RBP11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 DHRS2Q13268 280 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 TIGITQ495A1 244 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 MZT2BQ6NZ67 158 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 TCF24Q7RTU0 167 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 NPIPB3Q92617 1050 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 FLVCR2Q9UPI3 526 aa11.81□□□□□ -0.52
TSPAN4-201ENST00000346501 IGKV3-7A0A075B6H7 116 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 IGHV3OR16-13A0A075B7E8 117 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 IGHV3-74A0A0B4J1X5 117 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 IAPPP10997 89 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 TFPI2P48307 235 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 FAM110AQ9BQ89 295 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 GGTLC1Q9BX51 225 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 WFDC10AQ9H1F0 79 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
TSPAN4-201ENST00000346501 ZFP92A6NM28 416 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 IGKV1-17P01599 117 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 RD3LP0DJH9 198 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 NUP62P37198 522 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 APOC4P55056 127 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 WDR12Q9GZL7 423 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 C20orf85Q9H1P6 137 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 VSIRQ9H7M9 311 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 UBQLN2Q9UHD9 624 aa11.79□□□□□ -0.52
TSPAN4-201ENST00000346501 TCRBP04435 133 aa11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 ZNF846Q147U1 533 aa11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 ST8SIA2Q92186 375 aa11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 MAGT1Q9H0U3 335 aa11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
TSPAN4-201ENST00000346501 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 FAM240BA0A1B0GVZ2 78 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 RBMY1BA6NDE4 496 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 RBMY1EA6NEQ0 496 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 HELTA6NFD8 242 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 C3orf84H3BNL1 204 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 PLA2G10O15496 165 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 ADAP1O75689 374 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 DFFBO76075 338 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 TOMM40O96008 361 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 IL4P05112 153 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 HNRNPCP07910 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 RBMY1DP0C7P1 496 aaKnown RBP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 CRYBB3P26998 211 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 BTCP35070 178 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 AP2S1P53680 142 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 SPANXN5Q5MJ07 72 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 LINC00322Q6ZN03 302 aaPredicted RBP11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 GBGT1Q8N5D6 347 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 OR51G1Q8NGK1 321 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 TMEM170AQ8WVE7 144 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 CITED4Q96RK1 184 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 BATF3Q9NR55 127 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 PTTG2Q9NZH5 202 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 RABAC1Q9UI14 185 aa11.77□□□□□ -0.53
TSPAN4-201ENST00000346501 TRAV2A0A0B4J234 112 aa11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 A6NHS1 94 aa11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 P2RY1P47900 373 aa11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 NUDT15Q9NV35 164 aa11.76□□□□□ -0.53
TSPAN4-201ENST00000346501 TRAV6A0A075B6T7 132 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 UBE2CO00762 179 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 SCGB1D2O95969 90 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 S100A7P31151 101 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 ID3Q02535 119 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 GAMTQ14353 236 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 ODF3L2Q3SX64 289 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 FAM90A2PQ658T7 463 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 STXBP6Q8NFX7 210 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 PSENENQ9NZ42 101 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 GSKIPQ9P0R6 139 aa11.75□□□□□ -0.53
TSPAN4-201ENST00000346501 KIR2DL5BA0A0G2JN68 375 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 KIR2DL5BA0A0G2JPC4 375 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 SNRPGP15A8MWD9 76 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 CFDP00746 253 aaPredicted RBP11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 APOHP02749 345 aaPredicted RBP11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 H2AFB2P0C5Z0 115 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 PSG1P11464 419 aa11.74□□□□□ -0.53
TSPAN4-201ENST00000346501 KIR2DL5AQ8N109 375 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms