RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 PCNX1Q96RV3 2341 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 TDRG1Q3Y452 100 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 CCDC144NLQ6NUI1 221 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 RNF144BQ7Z419 303 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 IGLL1P15814 213 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 CFPP27918 469 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 FAM201AQ5SY85 155 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 LYPD6BQ8NI32 183 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
SRPK1-201ENST00000346162 HEATR1Q9H583 2144 aaKnown RBP12.89□□□□□ -0.35
SRPK1-201ENST00000346162 A0A1B0GUT8 65 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 H3BTX0 84 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 MCRIP2Q9BUT9 160 aaKnown RBP12.89□□□□□ -0.35
SRPK1-201ENST00000346162 IGHV2-26A0A0B4J1V2 119 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 MBNL2Q5VZF2 373 aaKnown RBP12.89□□□□□ -0.35
SRPK1-201ENST00000346162 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
SRPK1-201ENST00000346162 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 DNM1P46Q6ZS02 220 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
SRPK1-201ENST00000346162 TMEM30BQ3MIR4 351 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 TRAV24A0A0B4J272 114 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 PRSS2P07478 247 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 RPS20P60866 119 aaKnown RBP12.88□□□□□ -0.35
SRPK1-201ENST00000346162 OR4C13Q8NGP0 309 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 FER1L5A0AVI2 2057 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 PLCE1Q9P212 2302 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 CD59P13987 128 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 ETDBQ3ZM63 59 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 OR9G1Q8NH87 305 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 IGKV1-27A0A075B6S5 117 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 PEX7O00628 323 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 MMP23AO75900 390 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 CX3CL1P78423 397 aa12.88□□□□□ -0.35
SRPK1-201ENST00000346162 MEF2CQ06413 473 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-201ENST00000346162 CD300EQ496F6 205 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-201ENST00000346162 RPP21Q9H633 154 aaKnown RBP12.88□□□□□ -0.35
SRPK1-201ENST00000346162 PLXNA4Q9HCM2 1894 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 TRAV5A0A0B4J249 113 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 KLRB1Q12918 225 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 RBPMS2Q6ZRY4 209 aaKnown RBP12.87□□□□□ -0.35
SRPK1-201ENST00000346162 WDR31Q8NA23 367 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 KLK15Q9H2R5 256 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 TNFRSF19Q9NS68 423 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 TMEM144Q7Z5S9 345 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 WFDC12Q8WWY7 111 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 FOXC2Q99958 501 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 SAP30O75446 220 aa12.87□□□□□ -0.35
SRPK1-201ENST00000346162 IGFBP2P18065 325 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 SS18L1O75177 396 aaPredicted RBP12.86□□□□□ -0.35
SRPK1-201ENST00000346162 Q0VFX4 171 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 ZNF146Q15072 292 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 PRR31Q5SQ13 230 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 A8MWV9 139 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 RNFT1Q5M7Z0 435 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 FAM216BQ8N7L0 139 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 QRFPP83859 136 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 ZNF585BQ52M93 769 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 NMSQ5H8A3 153 aa12.86□□□□□ -0.35
SRPK1-201ENST00000346162 SPANXN1Q5VSR9 72 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 SPRR3Q9UBC9 169 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 C9orf118A6NHY6 69 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 PLSCR4Q9NRQ2 329 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 YPEL3P61236 119 aaPredicted RBP12.85□□□□□ -0.35
SRPK1-201ENST00000346162 PCSK4Q6UW60 755 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 WDR83OSQ9Y284 106 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 HELZP42694 1942 aaKnown RBP12.85□□□□□ -0.35
SRPK1-201ENST00000346162 ERVK11-1P61568 191 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
SRPK1-201ENST00000346162 H3BRM9 83 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 IGHV3-48P01763 117 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 TMPRSS3P57727 454 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 NPIPB3Q92617 1050 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 FANCMQ8IYD8 2048 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 WISP1O95388 367 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
SRPK1-201ENST00000346162 DENND4AQ7Z401 1863 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 IGLC7A0M8Q6 106 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 C9JCJ5 164 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 HOXA3O43365 443 aaPredicted RBP12.83□□□□□ -0.36
SRPK1-201ENST00000346162 GATA2P23769 480 aaPredicted RBP12.83□□□□□ -0.36
SRPK1-201ENST00000346162 BVES-AS1Q5T3Y7 98 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 OR52E5Q8NH55 327 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 LSM4Q9Y4Z0 139 aaKnown RBP12.83□□□□□ -0.36
SRPK1-201ENST00000346162 K7EP34 96 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 WDR82Q6UXN9 313 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 GPR82Q96P67 336 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 PLXNA2O75051 1894 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 REG1AP05451 166 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 RASL11AQ6T310 242 aa12.83□□□□□ -0.36
SRPK1-201ENST00000346162 PPBPP02775 128 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 PRTN3P24158 256 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 ORMDL3Q8N138 153 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 CADP27708 2225 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 OR9G9P0C7N8 305 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
SRPK1-201ENST00000346162 IFI27L1Q96BM0 104 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms