RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 TRAV5A0A0B4J249 113 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 OCIAD2Q56VL3 154 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 NABP1Q96AH0 204 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 IMMP1LQ96LU5 166 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 ASCL2Q99929 193 aa14.5□□□□□ -0.09
SPAST-202ENST00000345662 MRPS18CQ9Y3D5 142 aaKnown RBP14.5□□□□□ -0.09
SPAST-202ENST00000345662 KLF2Q9Y5W3 355 aaPredicted RBP14.5□□□□□ -0.09
SPAST-202ENST00000345662 SUMO2P61956 95 aaKnown RBP14.5□□□□□ -0.09
SPAST-202ENST00000345662 NUP35Q8NFH5 326 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 GAGE1Q13065 139 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 TMEM95Q3KNT9 176 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 FAM106AQ4KMX7 169 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 DMRTC2Q8IXT2 367 aaPredicted RBP14.49□□□□□ -0.09
SPAST-202ENST00000345662 C1orf162Q8NEQ5 155 aaPredicted RBP14.49□□□□□ -0.09
SPAST-202ENST00000345662 CDKN1AP38936 164 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 CST9LQ9H4G1 147 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 PNRC2Q9NPJ4 139 aaKnown RBP14.49□□□□□ -0.09
SPAST-202ENST00000345662 EFNA2O43921 213 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 CELA3BP08861 270 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 ZFAND6Q6FIF0 208 aa14.49□□□□□ -0.09
SPAST-202ENST00000345662 H7C1H1 209 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 GAGE2BQ13066 116 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 KIR3DS1Q14943 382 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 GAGE2EQ4V326 116 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 GAGE2DQ9UEU5 116 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 IGHV2OR16-5A0A0B4J2B6 119 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 ZNF815PA8K554 130 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 FOXH1O75593 365 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 CEACAM4O75871 244 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 PVRIGQ6DKI7 326 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 FGFBP3Q8TAT2 258 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 MOB4Q9Y3A3 225 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 RALGAPA1Q6GYQ0 2036 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 NKX2-8O15522 239 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 IGHV3-23P01764 117 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 FHL1Q13642 323 aa14.48□□□□□ -0.09
SPAST-202ENST00000345662 PAX2Q02962 417 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 FOXF2Q12947 444 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 ORMDL2Q53FV1 153 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 RPRMLQ8N4K4 120 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 FBXL7Q9UJT9 491 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 CHTOPQ9Y3Y2 248 aaKnown RBP14.47□□□□□ -0.09
SPAST-202ENST00000345662 TRAV8-4A0A0B4J246 113 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 Q6ZS49 121 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 ZIC4Q8N9L1 334 aa14.47□□□□□ -0.09
SPAST-202ENST00000345662 ITGB1BP1O14713 200 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 RNF125Q96EQ8 232 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 SDK2Q58EX2 2172 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 A0A0G2JRQ6 117 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 A0A1B0GUS0 222 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 IGHV4-39P01824 125 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 MRPL14Q6P1L8 145 aaKnown RBP14.46□□□□□ -0.09
SPAST-202ENST00000345662 IGHV3-66A0A0C4DH42 116 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 IGHV1-2P23083 117 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 KIR3DL3Q8N743 410 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 DPM3Q9P2X0 92 aa14.46□□□□□ -0.09
SPAST-202ENST00000345662 IGHV3-49A0A0A0MS15 119 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 C5orf63A6NC05 138 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 NPFFO15130 113 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 LILRA1O75019 489 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 JMJD8Q96S16 334 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 KLHDC3Q9BQ90 382 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 SPTA1P02549 2419 aa14.46□□□□□ -0.1
SPAST-202ENST00000345662 LOC105371242A0A075B767 164 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 OR13C6PQ8NH95 151 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 C8orf46Q8TAG6 207 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 TRBV6-6A0A0A6YYG2 114 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 GTSCR1Q86UQ5 136 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 VWCEQ96DN2 955 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 D6R8Y8 96 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 TDGF1P13385 188 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 EVI2AP22794 236 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 TMEM42Q69YG0 159 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 TMEM190Q8WZ59 177 aa14.45□□□□□ -0.1
SPAST-202ENST00000345662 IGLC2P0DOY2 106 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 IGLC3P0DOY3 106 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 H3BRM9 83 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 TFF1P04155 84 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 Q6ZRM9 215 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 TNFRSF18Q9Y5U5 241 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 F2Z2F3 143 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 NTF4P34130 210 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 FAM71F2Q6NXP2 309 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 OR10W1Q8NGF6 305 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 SNRPD3P62318 126 aaKnown RBP14.44□□□□□ -0.1
SPAST-202ENST00000345662 PRR31Q5SQ13 230 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 C5orf24Q7Z6I8 188 aa14.44□□□□□ -0.1
SPAST-202ENST00000345662 LHX2P50458 406 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 ZNF318Q5VUA4 2279 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 SPAARA0A1B0GVQ0 90 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 PSMB11A5LHX3 300 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 RAX2Q96IS3 184 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 ZNF581Q9P0T4 197 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 ANK1P16157 1881 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 IGKV1D-33P01593 117 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 IGKV1-33P01594 117 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 ARPC1AQ92747 370 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 SLC50A1Q9BRV3 221 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 ANAPC10Q9UM13 185 aa14.43□□□□□ -0.1
SPAST-202ENST00000345662 C15orf62A8K5M9 175 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms