RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 DMRTC2Q8IXT2 367 aaPredicted RBP14.98□□□□□ -0.01
SMC4-201ENST00000344722 DEFB124Q8NES8 71 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 FBXL15Q9H469 300 aa14.98□□□□□ -0.01
SMC4-201ENST00000344722 C8orf46Q8TAG6 207 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 CLPSP04118 112 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 ASCL4Q6XD76 172 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 IMMP1LQ96LU5 166 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 KIR3DL3Q8N743 410 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 ZIC4Q8N9L1 334 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 MAFAQ8NHW3 353 aaPredicted RBP14.97□□□□□ -0.01
SMC4-201ENST00000344722 C21orf62Q9NYP8 219 aa14.97□□□□□ -0.01
SMC4-201ENST00000344722 TEX43Q6ZNM6 134 aa14.96□□□□□ -0.01
SMC4-201ENST00000344722 FAM216BQ8N7L0 139 aa14.96□□□□□ -0.01
SMC4-201ENST00000344722 CELA3AP09093 270 aa14.96□□□□□ -0.01
SMC4-201ENST00000344722 KLF17Q5JT82 389 aaPredicted RBP14.96□□□□□ -0.01
SMC4-201ENST00000344722 KIF26BQ2KJY2 2108 aa14.96□□□□□ -0.02
SMC4-201ENST00000344722 F2Z2F3 143 aa14.96□□□□□ -0.02
SMC4-201ENST00000344722 H3BRM9 83 aa14.96□□□□□ -0.02
SMC4-201ENST00000344722 H7C1H1 209 aa14.96□□□□□ -0.02
SMC4-201ENST00000344722 FGFBP3Q8TAT2 258 aa14.96□□□□□ -0.02
SMC4-201ENST00000344722 D6R8Y8 96 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 FOXF2Q12947 444 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 ADAMTSL5Q6ZMM2 481 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 GTSCR1Q86UQ5 136 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 IGHV4-39P01824 125 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 NTF4P34130 210 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 SMAD7O15105 426 aaKnown RBP14.95□□□□□ -0.02
SMC4-201ENST00000344722 IGHV2OR16-5A0A0B4J2B6 119 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 C5orf63A6NC05 138 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 C15orf62A8K5M9 175 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 SPEM2Q0P670 501 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 TMEM95Q3KNT9 176 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 Q6ZRM9 215 aa14.95□□□□□ -0.02
SMC4-201ENST00000344722 DLX4Q92988 240 aaPredicted RBP14.95□□□□□ -0.02
SMC4-201ENST00000344722 FAM231BA6NCW3 169 aa14.94□□□□□ -0.02
SMC4-201ENST00000344722 C18orf32Q8TCD1 76 aa14.94□□□□□ -0.02
SMC4-201ENST00000344722 CSRP2Q16527 193 aa14.94□□□□□ -0.02
SMC4-201ENST00000344722 MRPL14Q6P1L8 145 aaKnown RBP14.94□□□□□ -0.02
SMC4-201ENST00000344722 TP53BP1Q12888 1972 aaPredicted RBP14.94□□□□□ -0.02
SMC4-201ENST00000344722 RNF125Q96EQ8 232 aa14.94□□□□□ -0.02
SMC4-201ENST00000344722 CELA3BP08861 270 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 ARTNQ5T4W7 220 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 IGKV3D-15A0A087WSY6 115 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 IGKV3-15P01624 115 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 IGLV3-19P01714 112 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 SELLP14151 372 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 TCRAP04437 139 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 FAM201AQ5SY85 155 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 CDPF1Q6NVV7 123 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 KLHDC3Q9BQ90 382 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 RSPO3Q9BXY4 272 aaPredicted RBP14.93□□□□□ -0.02
SMC4-201ENST00000344722 LOC105371242A0A075B767 164 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 LINC01549A6NIU2 74 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 LAGE3Q14657 143 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 PSG3Q16557 428 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 SELENOKQ9Y6D0 94 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 SBF1O95248 1867 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 NPFFO15130 113 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 PF4V1P10720 104 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 IGHV1-2P23083 117 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 GFRA4Q9GZZ7 299 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 ZNF581Q9P0T4 197 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 UNC13CQ8NB66 2214 aa14.93□□□□□ -0.02
SMC4-201ENST00000344722 FNDC10F2Z333 226 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 ZNF726P1Q15940 193 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 RNFT1Q5M7Z0 435 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 DYNLRB2Q8TF09 96 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 IGHV3-35A0A0C4DH35 117 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 SPINK8P0C7L1 97 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 FAM106AQ4KMX7 169 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 PRR7Q8TB68 274 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 SLC50A1Q9BRV3 221 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 LOC102723996A0A087X1L8 192 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 C9orf118A6NHY6 69 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 PAX1P15863 534 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 RP1P56715 2156 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 IGHV2-26A0A0B4J1V2 119 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 LHX2P50458 406 aa14.92□□□□□ -0.02
SMC4-201ENST00000344722 SUMO2P61956 95 aaKnown RBP14.92□□□□□ -0.02
SMC4-201ENST00000344722 EVI2AP22794 236 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 CDKN1BP46527 198 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 CEACAM4O75871 244 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 PAX9P55771 341 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 RNF115Q9Y4L5 304 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 GFRA3O60609 400 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 PLNP26678 52 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 IL15RAQ13261 267 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 ERG28Q9UKR5 140 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 S4R3C0 116 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 FREM3P0C091 2139 aa14.91□□□□□ -0.02
SMC4-201ENST00000344722 IGHV3-23P01764 117 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 DDB2Q92466 427 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 VWCEQ96DN2 955 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 YAE1D1Q9NRH1 226 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 SPANXA1Q9NS26 97 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 KIR2DL5BA0A0G2JN68 375 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 KIR2DL5BA0A0G2JPC4 375 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 C5orf24Q7Z6I8 188 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 KIR2DL5AQ8N109 375 aa14.9□□□□□ -0.02
SMC4-201ENST00000344722 CHAC1Q9BUX1 264 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms