RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 C11orf44Q8N8P7 122 aa5.91□□□□□ -1.46
ZNF540-202ENST00000343599 OR10G8Q8NGN5 311 aa5.91□□□□□ -1.46
ZNF540-202ENST00000343599 NABP1Q96AH0 204 aa5.91□□□□□ -1.46
ZNF540-202ENST00000343599 AMELYQ99218 206 aa5.91□□□□□ -1.46
ZNF540-202ENST00000343599 NF1P21359 2839 aa5.91□□□□□ -1.46
ZNF540-202ENST00000343599 TRAV38-1A0A0B4J264 116 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 A0A1B0GWA3 101 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SRSF10O75494 262 aaKnown RBP5.9□□□□□ -1.46
ZNF540-202ENST00000343599 IGHG1P01857 330 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 VDAC1P21796 283 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SERF2P84101 59 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 PLP2Q04941 152 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SRYQ05066 204 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SPATA31B1PQ5VZV4 182 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SLC25A34Q6PIV7 304 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF562Q6V9R5 426 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 FA2HQ7L5A8 372 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 LRRC75AQ8NAA5 344 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 OR2K2Q8NGT1 345 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 OR10X1Q8NGY0 326 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 RTN4IP1Q8WWV3 396 aaPredicted RBP5.9□□□□□ -1.46
ZNF540-202ENST00000343599 C10orf35Q96D05 121 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 PECRQ9BY49 303 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 VSIRQ9H7M9 311 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 PRSS37A4D1T9 235 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 F8WDY8 70 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 GNG4P50150 75 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 TMEM50BP56557 158 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 LCN12Q6JVE5 192 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 LINC00528Q8N1L1 170 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 C18orf32Q8TCD1 76 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 RNF133Q8WVZ7 376 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 ZC2HC1AQ96GY0 325 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 RCHY1Q96PM5 261 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 PKIBQ9C010 78 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 WDR61Q9GZS3 305 aaKnown RBP5.9□□□□□ -1.46
ZNF540-202ENST00000343599 DYNLRB1Q9NP97 96 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 PNRC2Q9NPJ4 139 aaKnown RBP5.9□□□□□ -1.46
ZNF540-202ENST00000343599 FAM206AQ9NX38 181 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 IL36GQ9NZH8 169 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 ONECUT1Q9UBC0 465 aa5.9□□□□□ -1.46
ZNF540-202ENST00000343599 SOCS1O15524 211 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 AREGP15514 252 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 PMCHP20382 165 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 CRYBB3P26998 211 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 ID1P41134 155 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 IER3P46695 156 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 ID3Q02535 119 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 C8orf86Q6ZUL3 223 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 PRR22Q8IZ63 422 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 TSKUQ8WUA8 353 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 GPER1Q99527 375 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 TXNIPQ9H3M7 391 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 HES4Q9HCC6 221 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 VPREB3Q9UKI3 123 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 ITPR2Q14571 2701 aa5.9□□□□□ -1.47
ZNF540-202ENST00000343599 A0A1W2PPV4 95 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 FOXI3A8MTJ6 420 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 J3QR89 54 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 PSG2P11465 335 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 GPR12P47775 334 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 UBE2E1P51965 193 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 CRIP2P52943 208 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF841Q6ZN19 808 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 SPATA12Q7Z6I5 190 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 VSTM2AQ8TAG5 236 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 RNF183Q96D59 192 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 ST6GALNAC5Q9BVH7 336 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 LINC00574Q9H8X3 128 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 ZNF286AQ9HBT8 521 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 SCRT2Q9NQ03 307 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 KCNIP1Q9NZI2 227 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 ZNRD1Q9P1U0 126 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 B9D1Q9UPM9 204 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 IGKV1D-42A0A075B6H8 117 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 FAM181BA6NEQ2 426 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 HELTA6NFD8 242 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 FCN1O00602 326 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 CRXO43186 299 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 PAGE4O60829 102 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 IGHV1-46P01743 117 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 MT-ND6P03923 174 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 NPY1RP25929 384 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 NKX2-1P43699 371 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 MEF2CQ06413 473 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 SP6Q3SY56 376 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 SPATA46Q5T0L3 261 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 MDP1Q86V88 176 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 OR5D14Q8NGL3 314 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 OR10AG1Q8NH19 301 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 C1orf147Q96MC9 270 aaPredicted RBP5.89□□□□□ -1.47
ZNF540-202ENST00000343599 WWC2-AS2Q96NR7 200 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 HECTD1Q9ULT8 2610 aa5.89□□□□□ -1.47
ZNF540-202ENST00000343599 SLC17A3O00476 420 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 DEGS1O15121 323 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 CST7O76096 145 aa5.88□□□□□ -1.47
ZNF540-202ENST00000343599 CNIH1O95406 144 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms