RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 MED13Q9UHV7 2174 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 C16orf92Q96LL3 132 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 METTL26Q96S19 204 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 PFN1P07737 140 aaKnown RBP5.91□□□□□ -1.46
VCAN-202ENST00000342785 RNF224P0DH78 156 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 PSG9Q00887 426 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 MYOZ3Q8TDC0 251 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 IGHV3-49A0A0A0MS15 119 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 MUC21A0A0G2JKD1 596 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 MUC21A0A140T8X8 626 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 MGPP08493 103 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 RPS20P60866 119 aaKnown RBP5.91□□□□□ -1.46
VCAN-202ENST00000342785 MLANAQ16655 118 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 MUC21Q5SSG8 566 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 DPF1Q92782 380 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 PARD6GQ9BYG4 376 aaPredicted RBP5.91□□□□□ -1.46
VCAN-202ENST00000342785 C19orf67A6NJJ6 358 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 CD33P20138 364 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 Q6ZS92 163 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 TMEM167AQ8TBQ9 72 aa5.91□□□□□ -1.46
VCAN-202ENST00000342785 COL25A1Q9BXS0 654 aaPredicted RBP5.91□□□□□ -1.46
VCAN-202ENST00000342785 IGKV1-16P04430 117 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 BTF3P20290 206 aaKnown RBP5.9□□□□□ -1.46
VCAN-202ENST00000342785 RAB9AP51151 201 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 RBPMS2Q6ZRY4 209 aaKnown RBP5.9□□□□□ -1.46
VCAN-202ENST00000342785 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 OR4C46A6NHA9 309 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 C9JCJ5 164 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 NPPCP23582 126 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 ZNF600Q6ZNG1 722 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 COL4A4P53420 1690 aaPredicted RBP5.9□□□□□ -1.46
VCAN-202ENST00000342785 ZNF726P1Q15940 193 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 HAPLN4Q86UW8 402 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 TMEM208Q9BTX3 173 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 ZGRF1Q86YA3 2104 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 AREGP15514 252 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 HTN1P15515 57 aa5.9□□□□□ -1.46
VCAN-202ENST00000342785 C2CD3Q4AC94 2353 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 IGHV3-23P01764 117 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 KLRB1Q12918 225 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 PRSS8Q16651 343 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 TMEM200BQ69YZ2 307 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 SOX21Q9Y651 276 aaPredicted RBP5.9□□□□□ -1.47
VCAN-202ENST00000342785 NBR2O15453 112 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 ZNF324O75467 553 aaPredicted RBP5.9□□□□□ -1.47
VCAN-202ENST00000342785 Q1RN00 199 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 DTX1Q86Y01 620 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 MIEN1Q9BRT3 115 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 GNB1LQ9BYB4 327 aa5.9□□□□□ -1.47
VCAN-202ENST00000342785 LOC102724200A0A096LPH7 203 aaPredicted RBP5.89□□□□□ -1.47
VCAN-202ENST00000342785 TIMM23O14925 209 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 FOXH1O75593 365 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 SCGB1C2P0DMR2 95 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 CLEC2AQ6UVW9 174 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 SLC25A48Q6ZT89 311 aaKnown RBP5.89□□□□□ -1.47
VCAN-202ENST00000342785 CIARTQ8N365 385 aaPredicted RBP5.89□□□□□ -1.47
VCAN-202ENST00000342785 RNF125Q96EQ8 232 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 GAFA1Q96PS6 74 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 SFTPCP11686 197 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 UQCRFS1P47985 274 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 TFPI2P48307 235 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 CX3CL1P78423 397 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 ZNF841Q6ZN19 808 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 Q6ZSR3 168 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 FMC1Q96HJ9 113 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 MAP1LC3AQ9H492 121 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 TECTAO75443 2155 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 LHFPL4Q7Z7J7 247 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 FAM169BQ8N8A8 192 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 LYPD6BQ8NI32 183 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 TANC1Q9C0D5 1861 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 TMEM178BH3BS89 294 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 APOHP02749 345 aaPredicted RBP5.89□□□□□ -1.47
VCAN-202ENST00000342785 GPR183P32249 361 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
VCAN-202ENST00000342785 RPRMLQ8N4K4 120 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 OR10J6PQ8NGY7 276 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 FGF23Q9GZV9 251 aaPredicted RBP5.89□□□□□ -1.47
VCAN-202ENST00000342785 IGHV3OR16-10A0A075B7F0 116 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 K7ERU9 68 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 DGAT2L7PQ6IED9 249 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 ST6GALNAC3Q8NDV1 305 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 ST6GALNAC6Q969X2 333 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 PRELID3AQ96N28 172 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 VKORC1Q9BQB6 163 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 CHODLQ9H9P2 273 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 OTORQ9NRC9 128 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 DCAF16Q9NXF7 216 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 PLXNB3Q9ULL4 1909 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 A0A1W2PS18 150 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 NUDT3O95989 172 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 IGHV1-8P0DP01 117 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 ADIPOQQ15848 244 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 NUDT10Q8NFP7 164 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 ARPC1AQ92747 370 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 NUDT11Q96G61 164 aa5.89□□□□□ -1.47
VCAN-202ENST00000342785 RNASE2P10153 161 aaKnown RBP5.88□□□□□ -1.47
VCAN-202ENST00000342785 TSKUQ8WUA8 353 aa5.88□□□□□ -1.47
VCAN-202ENST00000342785 TNFRSF14Q92956 283 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms