RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 TREML4Q6UXN2 200 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 SIGLEC9Q9Y336 463 aa16.03■□□□□ 0.16
SEMA6C-201ENST00000341697 CIARTQ8N365 385 aaPredicted RBP16.02■□□□□ 0.16
SEMA6C-201ENST00000341697 SPRY4Q9C004 299 aa16.02■□□□□ 0.16
SEMA6C-201ENST00000341697 HBBP68871 147 aa16.02■□□□□ 0.16
SEMA6C-201ENST00000341697 DLX1P56177 255 aa16.02■□□□□ 0.15
SEMA6C-201ENST00000341697 A0A1W2PNU3 283 aaPredicted RBP16.02■□□□□ 0.15
SEMA6C-201ENST00000341697 DUX3Q96PT4 197 aa16.02■□□□□ 0.15
SEMA6C-201ENST00000341697 WFDC1Q9HC57 220 aa16.02■□□□□ 0.15
SEMA6C-201ENST00000341697 NUDT3O95989 172 aa16.01■□□□□ 0.15
SEMA6C-201ENST00000341697 AP5S1Q9NUS5 200 aa16.01■□□□□ 0.15
SEMA6C-201ENST00000341697 SRIP30626 198 aa16.01■□□□□ 0.15
SEMA6C-201ENST00000341697 WDR86Q86TI4 376 aa16.01■□□□□ 0.15
SEMA6C-201ENST00000341697 PYYP10082 97 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 PAX1P15863 534 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 PLXNB3Q9ULL4 1909 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 BEND2Q8NDZ0 799 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 ATG101Q9BSB4 218 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 A0A1B0GWJ7 208 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 A0A1W2PRE2 83 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 NSUN5P1Q3KNT7 163 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 MARVELD3Q96A59 401 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 NCOR1P1Q9H4R4 102 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 ZFP30Q9Y2G7 519 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 M0R381 172 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 UBE2E1P51965 193 aa16■□□□□ 0.15
SEMA6C-201ENST00000341697 DIRC3C9JPN6 131 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 VN1R17PQ8TDU5 208 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 DCAF16Q9NXF7 216 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 ZGRF1Q86YA3 2104 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 LINC00205P59089 165 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 KIAA1644Q3SXP7 199 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 RNASE4P34096 147 aaKnown RBP15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 ZNF585BQ52M93 769 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 UQCRFS1P47985 274 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 C19orf54Q5BKX5 351 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 SPSB3Q6PJ21 355 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 TBX15Q96SF7 602 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 LINC01587Q99440 93 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 KIR2DL4Q99706 377 aa15.99■□□□□ 0.15
SEMA6C-201ENST00000341697 CBY3A6NI87 242 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 ERVK11-1P61568 191 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 C1orf147Q96MC9 270 aaPredicted RBP15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 F11RQ9Y624 299 aaKnown RBP15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 TRBV20OR9-2A0A075B6H5 130 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 DUSP14O95147 198 aaKnown RBP15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 GGTLC1Q9BX51 225 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 RPP21Q9H633 154 aaKnown RBP15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 IL36BQ9NZH7 164 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 CARHSP1Q9Y2V2 147 aaKnown RBP15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 GCSAMLQ5JQS6 135 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 TMEM14EPQ6UXP3 125 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 EPDR1Q9UM22 224 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 STHQ8IWL8 128 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 HSPB9Q9BQS6 159 aa15.98■□□□□ 0.15
SEMA6C-201ENST00000341697 CFHR2P36980 270 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 TEX36Q5VZQ5 186 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 WNK2Q9Y3S1 2297 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 M0R143 59 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 SLC17A3O00476 420 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 GNG5P63218 68 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 IGKV1-6A0A0C4DH72 117 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 H7C1H1 209 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 LEPROTL1O95214 131 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 AREGP15514 252 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 KLF17Q5JT82 389 aaPredicted RBP15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 CADP27708 2225 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 OR4C46A6NHA9 309 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 PSG1P11464 419 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 SRD5A1P18405 259 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 CCL20P78556 96 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 SDF2L1Q9HCN8 221 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 GTF3C1Q12789 2109 aa15.97■□□□□ 0.15
SEMA6C-201ENST00000341697 SRSF9Q13242 221 aaKnown RBP eCLIP15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 ASCL2Q99929 193 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 IGKV1-16P04430 117 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 SMIM6P0DI80 62 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 A0A1B0GUT8 65 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 Q6AWC8 147 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 TEX38Q6PEX7 206 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 FABP5P3A8MUU1 101 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 TRGV9Q99603 122 aa15.96■□□□□ 0.15
SEMA6C-201ENST00000341697 TRBV7-1A0A0A6YYK4 115 aa15.96■□□□□ 0.14
SEMA6C-201ENST00000341697 SIGLEC15Q6ZMC9 328 aa15.96■□□□□ 0.14
SEMA6C-201ENST00000341697 Q96MF0 132 aa15.96■□□□□ 0.14
SEMA6C-201ENST00000341697 IFITM10A6NMD0 228 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 ZNF502Q8TBZ5 544 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 IGHV2-70DA0A0C4DH43 119 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 LOXP28300 417 aaPredicted RBP15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 LEPP41159 167 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 MBD3L1Q8WWY6 194 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 USMG5Q96IX5 58 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 RPL13AP40429 203 aaKnown RBP15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 GLMPQ8WWB7 406 aa15.95■□□□□ 0.14
SEMA6C-201ENST00000341697 LRRK1Q38SD2 2015 aa15.94■□□□□ 0.14
SEMA6C-201ENST00000341697 CBLN1P23435 193 aa15.94■□□□□ 0.14
SEMA6C-201ENST00000341697 MAPK1IP1LQ8NDC0 245 aa15.94■□□□□ 0.14
SEMA6C-201ENST00000341697 OR10AG1Q8NH19 301 aa15.94■□□□□ 0.14
SEMA6C-201ENST00000341697 SOX21Q9Y651 276 aaPredicted RBP15.94■□□□□ 0.14
SEMA6C-201ENST00000341697 GRIFINA4D1Z8 144 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms