RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 LRBAP50851 2863 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF891A8MT65 544 aaPredicted RBP9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 MT-CO2P00403 227 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 NBEAP1P0C6P0 100 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 SAA1P0DJI8 122 aaPredicted RBP9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 CT45A6P0DMU7 189 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 CT45A5P0DMU8 189 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 CT45A7P0DMV0 189 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 PSG1P11464 419 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 BMI1P35226 326 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 MFAP2P55001 183 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 C18orf32Q8TCD1 76 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 WFDC12Q8WWY7 111 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 ASCL2Q99929 193 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 TXNDC17Q9BRA2 123 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 UQCR10Q9UDW1 63 aa9.71□□□□□ -0.86
CCDC144CP-201ENST00000340196 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 DPRXA6NFQ7 191 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 ISLRO14498 428 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 DLX1P56177 255 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 TRAT1Q6PIZ9 186 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF841Q6ZN19 808 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 DCHS2Q6V1P9 2916 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 RAI1Q7Z5J4 1906 aaPredicted RBP9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 APCSP02743 223 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 AMY1AP04745 511 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 FOXA3P55318 350 aaPredicted RBP9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 GUSBP1Q15486 140 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 EBLN2Q6P2I7 272 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 TMEM178AQ8NBL3 297 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 OR4B1Q8NGF8 309 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 ASH1LQ9NR48 2969 aaKnown RBP9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 DSCAML1Q8TD84 2053 aa9.7□□□□□ -0.86
CCDC144CP-201ENST00000340196 TOX4O94842 621 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 CGB3P0DN86 165 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 CGB7P0DN87 165 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 LINC00173Q6ZV60 143 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 SPACA3Q8IXA5 215 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 BLNKQ8WV28 456 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 SLC25A33Q9BSK2 321 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 KBTBD11-OT1A0A1B0GTJ5 212 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 CEACAM4O75871 244 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 CCL3L1P16619 93 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 TNFSF4P23510 183 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 TMEM108Q6UXF1 575 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF439Q8NDP4 499 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 FAM167A-AS1Q96KT0 104 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 SLC35D1Q9NTN3 355 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 TIMM8BQ9Y5J9 83 aaPredicted RBP9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 GOSR1O95249 250 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 MOSP00540 346 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 RNASE2P10153 161 aaKnown RBP9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 PPOXP50336 477 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 FNDC4Q9H6D8 234 aaPredicted RBP9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 BET1LQ9NYM9 111 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 DKK4Q9UBT3 224 aa9.69□□□□□ -0.86
CCDC144CP-201ENST00000340196 SMIM27A0A1W2PRY6 76 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 IGLV1-44P01699 117 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 PRCDQ00LT1 54 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 MBNL2Q5VZF2 373 aaKnown RBP9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 SEM1Q6ZVN7 128 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 TCF24Q7RTU0 167 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 NUP35Q8NFH5 326 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 MRPL20Q9BYC9 149 aaKnown RBP9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF71Q9NQZ8 489 aaPredicted RBP9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 TMEM167BQ9NRX6 74 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 UPK2O00526 184 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 PATE2Q6UY27 113 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 LINC00322Q6ZN03 302 aaPredicted RBP9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 MEGF9Q9H1U4 602 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
CCDC144CP-201ENST00000340196 CUL9Q8IWT3 2517 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 H0Y8G0 127 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 C8orf88P0DMB2 117 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 PRRX1P54821 245 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 BHLHA15Q7RTS1 189 aaPredicted RBP9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 NPIPB3Q92617 1050 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF331Q9NQX6 463 aaPredicted RBP9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 AMMECR1Q9Y4X0 333 aaPredicted RBP9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 TRAV9-1A0A075B6T8 112 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 HSBP1O75506 76 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 TSPOP30536 169 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF138P52744 262 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 CCL8P80075 99 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 OR10J3Q5JRS4 329 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF596Q8TC21 504 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 RITA1Q96K30 269 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
CCDC144CP-201ENST00000340196 IGHV3-72A0A0B4J1Y9 119 aa9.66□□□□□ -0.86
CCDC144CP-201ENST00000340196 HIGD1CA8MV81 97 aa9.66□□□□□ -0.86
CCDC144CP-201ENST00000340196 M0R2Z0 102 aa9.66□□□□□ -0.86
CCDC144CP-201ENST00000340196 IGLL1P15814 213 aa9.66□□□□□ -0.86
CCDC144CP-201ENST00000340196 ZNF137PP52743 207 aa9.66□□□□□ -0.86
CCDC144CP-201ENST00000340196 WT1-ASQ06250 92 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms