RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 hDV102S1A0JD36 115 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 HLA-DQA1P01909 254 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 CORO2AQ92828 525 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 ZNF71Q9NQZ8 489 aaPredicted RBP13.1□□□□□ -0.31
SCARB1-202ENST00000339570 PGPA6NDG6 321 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 F2RL2O00254 374 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 SLC25A17O43808 307 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 RNASE2P10153 161 aaKnown RBP13.1□□□□□ -0.31
SCARB1-202ENST00000339570 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 FLYWCH2Q96CP2 140 aaKnown RBP13.1□□□□□ -0.31
SCARB1-202ENST00000339570 OSTCQ9NRP0 149 aa13.1□□□□□ -0.31
SCARB1-202ENST00000339570 SPAARA0A1B0GVQ0 90 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 PPOXP50336 477 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 PRRX1P54821 245 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 PRCDQ00LT1 54 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 SPATA12Q7Z6I5 190 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 CCL17Q92583 94 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 FNDC4Q9H6D8 234 aaPredicted RBP13.09□□□□□ -0.31
SCARB1-202ENST00000339570 LINC00305Q7Z4B0 112 aa13.09□□□□□ -0.31
SCARB1-202ENST00000339570 CBY3A6NI87 242 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 ZNF891A8MT65 544 aaPredicted RBP13.08□□□□□ -0.31
SCARB1-202ENST00000339570 CCL25O15444 150 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 KIR2DS2P43631 304 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 ERHP84090 104 aaKnown RBP13.08□□□□□ -0.31
SCARB1-202ENST00000339570 SARAFQ96BY9 339 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 RNF7Q9UBF6 113 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 ZFP30Q9Y2G7 519 aa13.08□□□□□ -0.31
SCARB1-202ENST00000339570 IZUMO1RA6ND01 250 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 MT-ND6P03923 174 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 VAMP3Q15836 100 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 TMEM249Q2WGJ8 235 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 CEP295Q9C0D2 2601 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 MUC21A0A0G2JKD1 596 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 MUC21A0A140T8X8 626 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 PEX7O00628 323 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 IGLL1P15814 213 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 TSPOP30536 169 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 CD69Q07108 199 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 MUC21Q5SSG8 566 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 RNASE8Q8TDE3 154 aaKnown RBP13.08□□□□□ -0.32
SCARB1-202ENST00000339570 RITA1Q96K30 269 aa13.08□□□□□ -0.32
SCARB1-202ENST00000339570 TBR1Q16650 682 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 FAM181BA6NEQ2 426 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 PRR33A8MZF0 331 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 WT1-ASQ06250 92 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 ETFRF1Q6IPR1 90 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 ZNF841Q6ZN19 808 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 SSX8Q7RTT4 187 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 DEFB123Q8N688 67 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 S4R3C0 116 aa13.07□□□□□ -0.32
SCARB1-202ENST00000339570 VWC2LB2RUY7 222 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 CTRLP40313 264 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 OR10J3Q5JRS4 329 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 ZNF474Q6S9Z5 364 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-202ENST00000339570 WFDC8Q8IUA0 241 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 IGF2BP2-AS1Q96M15 143 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 TNFRSF19Q9NS68 423 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 SPTAN1Q13813 2472 aaKnown RBP13.06□□□□□ -0.32
SCARB1-202ENST00000339570 APOA2P02652 100 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 CA7P43166 264 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
SCARB1-202ENST00000339570 LINC00322Q6ZN03 302 aaPredicted RBP13.06□□□□□ -0.32
SCARB1-202ENST00000339570 FAM167A-AS1Q96KT0 104 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 GAFA1Q96PS6 74 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 TRBV9A0A0B4J1U6 114 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 SMIM27A0A1W2PRY6 76 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 FAM87AP0C7U9 286 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 ESDP10768 282 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 MZT1Q08AG7 82 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 PATE2Q6UY27 113 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 WASHC3Q9Y3C0 194 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 OTOGLQ3ZCN5 2332 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 ARHGAP32A7KAX9 2087 aa13.06□□□□□ -0.32
SCARB1-202ENST00000339570 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 SELENOVP59797 346 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 DKK4Q9UBT3 224 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 IGHV1-46P01743 117 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 FXYD7P58549 80 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 PDPNQ86YL7 162 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 SLC25A10Q9UBX3 287 aaPredicted RBP13.05□□□□□ -0.32
SCARB1-202ENST00000339570 SSUH2Q9Y2M2 353 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 CBY1Q9Y3M2 126 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 TMEM177Q53S58 311 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 KLHDC1Q8N7A1 406 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
SCARB1-202ENST00000339570 TRAV9-1A0A075B6T8 112 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 hADV38S2A0JD32 116 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 SEM1Q6ZVN7 128 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 ZNF329Q86UD4 541 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 GUCD1Q96NT3 240 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 SFTPCP11686 197 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 AARDQ4LEZ3 155 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 MPV17L2Q567V2 206 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 OR1L8Q8NGR8 309 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 BET1LQ9NYM9 111 aa13.04□□□□□ -0.32
SCARB1-202ENST00000339570 RAI1Q7Z5J4 1906 aaPredicted RBP13.03□□□□□ -0.32
SCARB1-202ENST00000339570 A0A1W2PRE2 83 aa13.03□□□□□ -0.32
SCARB1-202ENST00000339570 IGLV1-44P01699 117 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms