RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ASPHD1Q5U4P2 390 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 BCL6BQ8N143 479 aaPredicted RBP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 KIR3DL3Q8N743 410 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 RNASEH2CQ8TDP1 164 aaKnown RBP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 C10orf105Q8TEF2 133 aa5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 F11RQ9Y624 299 aaKnown RBP5.86□□□□□ -1.47
SRFBP1-201ENST00000339397 PRRC2AP48634 2157 aaKnown RBP5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 FNDC10F2Z333 226 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 HAX1O00165 279 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 OR7C2O60412 319 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 CXorf1O96002 111 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 IFNA1P01562 189 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 UBE2E1P51965 193 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 ADIRFQ15847 76 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 RNF212Q495C1 297 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 HIST2H2BCQ6DN03 193 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 TMEM219Q86XT9 240 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 NPBQ8NG41 125 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 OR1P1Q8NH06 330 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 HSPB9Q9BQS6 159 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 FUT9Q9Y231 359 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 CREBBPQ92793 2442 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 EREGO14944 169 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 NDUFA3O95167 84 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 AVPP01185 164 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 IGHV3-23P01764 117 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 CRYGCP07315 174 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 CXCL1P09341 107 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 IGHV4-38-2P0DP08 117 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 RHEBQ15382 184 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 OR4X1Q8NH49 305 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 FAM167A-AS1Q96KT0 104 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 DNAJC4Q9NNZ3 241 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 MANBALQ9NQG1 85 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 TNFRSF19Q9NS68 423 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 TGIF2-C20orf24A0A0A6YYL0 155 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 TCRBV4S1A1TA0A5B7 111 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 H3BTX0 84 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 I3L2K1 104 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 OR5G3P0C626 314 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 EGR2P11161 476 aaPredicted RBP5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 ATP5IP56385 69 aaPredicted RBP5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 RPL23P62829 140 aaKnown RBP5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 PVRIGQ6DKI7 326 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 Q8N6K4 173 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 NECAP1Q8NC96 275 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 OR2T10Q8NGZ9 312 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 Q8WTZ3 238 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 YPEL4Q96NS1 127 aa5.85□□□□□ -1.47
SRFBP1-201ENST00000339397 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 K7EIM0 57 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 TMEM11P17152 192 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 MAS1LP35410 378 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 PAX8Q06710 450 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 ELOBQ15370 118 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 TMEM241Q24JQ0 296 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 Q8N9W7 124 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 OR1B1Q8NGR6 318 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 LINC00479Q96M42 142 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 RNF5Q99942 180 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 PIMREGQ9BSJ6 248 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 SLC25A2Q9BXI2 301 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 ZNF355PQ9NSJ1 428 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 ACANP16112 2415 aa5.84□□□□□ -1.47
SRFBP1-201ENST00000339397 TRAV40A0A0B4J280 105 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 TMEM250H0YL14 139 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 NPFFO15130 113 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 CLEC2AQ6UVW9 174 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 LINC00305Q7Z4B0 112 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 THAP8Q8NA92 274 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 TMEM116Q8NCL8 245 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 C22orf15Q8WYQ4 148 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 FANCD2OSQ96PS1 177 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 ELOVL1Q9BW60 279 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 LINC00527Q9UJ94 153 aa5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 KLF2Q9Y5W3 355 aaPredicted RBP5.84□□□□□ -1.48
SRFBP1-201ENST00000339397 IGHV3OR16-8A0A075B7F1 116 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 IGHV7-81A0A0B4J1V7 117 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 IGHV3-35A0A0C4DH35 117 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 GGTLC3B5MD39 225 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 IGKV1-17P01599 117 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 PSG1P11464 419 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 SUMO1P63165 101 aaKnown RBP5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 TMEM249Q2WGJ8 235 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 TIGITQ495A1 244 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 MINOS1Q5TGZ0 78 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 ZNF562Q6V9R5 426 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 C15orf54Q8N8G6 183 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 OR5AU1Q8NGC0 362 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 MALSU1Q96EH3 234 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 MLXQ9UH92 298 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 MINOS1-NBL1R4GNA1 71 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 A0A0U1RQK1 487 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 G3V318 75 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 COX7A2P2O60397 106 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 IGLC1P0CG04 106 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 RAB5AP20339 215 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 CRYBB3P26998 211 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 EBI3Q14213 229 aa5.83□□□□□ -1.48
SRFBP1-201ENST00000339397 C10orf113Q5VZT2 155 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms