RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 USF1P22415 310 aaPredicted RBP15.25■□□□□ 0.03
PSPC1-201ENST00000338910 TNXAQ16473 311 aa15.25■□□□□ 0.03
PSPC1-201ENST00000338910 C17orf58Q2M2W7 97 aa15.25■□□□□ 0.03
PSPC1-201ENST00000338910 IGF2BP2-AS1Q96M15 143 aa15.25■□□□□ 0.03
PSPC1-201ENST00000338910 GAFA1Q96PS6 74 aa15.25■□□□□ 0.03
PSPC1-201ENST00000338910 TMEM140Q9NV12 185 aa15.25■□□□□ 0.03
PSPC1-201ENST00000338910 TECRQ9NZ01 308 aaKnown RBP15.25■□□□□ 0.03
PSPC1-201ENST00000338910 FAM181BA6NEQ2 426 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 C17orf100A8MU93 164 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 GGTLC3B5MD39 225 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 M0R1X1 148 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 F2RL2O00254 374 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 CGB3P0DN86 165 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 CGB7P0DN87 165 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 IGLL1P15814 213 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 NPY1RP25929 384 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 EBLN2Q6P2I7 272 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 PPOXP50336 477 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 SLC24A4Q8NFF2 622 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 OR8B3Q8NGG8 313 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 WIPF2Q8TF74 440 aaPredicted RBP15.24■□□□□ 0.03
PSPC1-201ENST00000338910 OR8B2Q96RD0 313 aa15.24■□□□□ 0.03
PSPC1-201ENST00000338910 CA7P43166 264 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 OR4C5Q8NGB2 326 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 ZNF331Q9NQX6 463 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-201ENST00000338910 CACNA1AO00555 2505 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 CA1P00915 261 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-201ENST00000338910 MGST1P10620 155 aaKnown RBP15.23■□□□□ 0.03
PSPC1-201ENST00000338910 TNFRSF1AP19438 455 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 Q56UQ5 140 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 ZNF788Q6ZQV5 615 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 C1orf229Q6ZS94 237 aaPredicted RBP15.23■□□□□ 0.03
PSPC1-201ENST00000338910 NEUROG1Q92886 237 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 SERTAD4Q9NUC0 356 aa15.23■□□□□ 0.03
PSPC1-201ENST00000338910 KBTBD11-OT1A0A1B0GTJ5 212 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 HSBP1O75506 76 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 RASL11AQ6T310 242 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 IFI27L2Q9H2X8 130 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 GSX1Q9H4S2 264 aaPredicted RBP15.22■□□□□ 0.03
PSPC1-201ENST00000338910 C2orf70A6NJV1 201 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 C15orf61A6NNL5 157 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 CCL21O00585 134 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 FAM168AQ92567 244 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 NABP2Q9BQ15 211 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 COMMD5Q9GZQ3 224 aa15.22■□□□□ 0.03
PSPC1-201ENST00000338910 ANKHD1Q8IWZ3 2542 aaKnown RBP15.22■□□□□ 0.03
PSPC1-201ENST00000338910 KLF5Q13887 457 aaPredicted RBP15.21■□□□□ 0.03
PSPC1-201ENST00000338910 CT45A1Q5HYN5 189 aa15.21■□□□□ 0.03
PSPC1-201ENST00000338910 CT45A3Q8NHU0 189 aa15.21■□□□□ 0.03
PSPC1-201ENST00000338910 FAM216AQ8WUB2 273 aa15.21■□□□□ 0.03
PSPC1-201ENST00000338910 TRAV30A0A087WSZ9 112 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 A0A1W2PN81 502 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 M0R2Z0 102 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 UBE2G1P62253 170 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 CORO2AQ92828 525 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 SAP30LQ9HAJ7 183 aa15.21■□□□□ 0.02
PSPC1-201ENST00000338910 RAI1Q7Z5J4 1906 aaPredicted RBP15.2■□□□□ 0.02
PSPC1-201ENST00000338910 FAM90A27PA6NNH2 459 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 FNDC10F2Z333 226 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 PPBPP02775 128 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 LY6DQ14210 128 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 GDF5OSQ5U4N7 250 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 TEX36Q5VZQ5 186 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 SSX8Q7RTT4 187 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 CCL17Q92583 94 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 S1PR3Q99500 378 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 TNFRSF19Q9NS68 423 aa15.2■□□□□ 0.02
PSPC1-201ENST00000338910 OR7C2O60412 319 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 MBD6Q96DN6 1003 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 A0A1W2PRE2 83 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 RHOGP84095 191 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 LRRC10Q5BKY1 277 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 SPATA12Q7Z6I5 190 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 SSBP3Q9BWW4 388 aaPredicted RBP15.19■□□□□ 0.02
PSPC1-201ENST00000338910 PLEKHA3Q9HB20 300 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 NGBQ9NPG2 151 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 TMEM14BQ9NUH8 114 aa15.19■□□□□ 0.02
PSPC1-201ENST00000338910 SHISA9B4DS77 424 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 GRNP28799 593 aaKnown RBP15.18■□□□□ 0.02
PSPC1-201ENST00000338910 HSPE1P61604 102 aaKnown RBP15.18■□□□□ 0.02
PSPC1-201ENST00000338910 RNF151Q2KHN1 245 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 DDB2Q92466 427 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 FOXA2Q9Y261 457 aaPredicted RBP15.18■□□□□ 0.02
PSPC1-201ENST00000338910 PKD1L2Q7Z442 2459 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 LRBAP50851 2863 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 VSTM5A8MXK1 200 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 E7EQL1 145 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 MFAP2P55001 183 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 NHLRC2Q8NBF2 726 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 LINC01560Q8TB33 94 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 DSCAML1Q8TD84 2053 aa15.18■□□□□ 0.02
PSPC1-201ENST00000338910 IGKV1OR2-108A0A075B7D4 117 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 VAMP3Q15836 100 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 ASPHD1Q5U4P2 390 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 C16orf54Q6UWD8 224 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 KIR3DL3Q8N743 410 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 FAM122AQ96E09 287 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 ABCA4P78363 2273 aa15.17■□□□□ 0.02
PSPC1-201ENST00000338910 SAA2P0DJI9 122 aaPredicted RBP15.17■□□□□ 0.02
PSPC1-201ENST00000338910 KIR2DS2P43631 304 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms