RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 ZNF98A6NK75 572 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 TOX4O94842 621 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 SNRPCP09234 159 aaKnown RBP12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 NDPQ00604 133 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 CLEC12BQ2HXU8 276 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 C1QL4Q86Z23 238 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 OR5AU1Q8NGC0 362 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 FAM210BQ96KR6 192 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 PFN1P07737 140 aaKnown RBP12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 C5orf64Q2M2E5 130 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 C11orf52Q96A22 123 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 TMEM167BQ9NRX6 74 aa12.89□□□□□ -0.35
SCNN1A-202ENST00000338748 C5orf52A6NGY3 159 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 H7BYZ3 331 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 I3L2K1 104 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 S100A6P06703 90 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 TAS2R45P59539 299 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 FXYD3Q14802 87 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 KLF17Q5JT82 389 aaPredicted RBP12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 C10orf113Q5VZT2 155 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 ETFRF1Q6IPR1 90 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 C12orf57Q99622 126 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 MRPL32Q9BYC8 188 aaKnown RBP12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 TRGC2P03986 189 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 ORM2P19652 201 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 Q8N6K4 173 aa12.88□□□□□ -0.35
SCNN1A-202ENST00000338748 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 CRYBB3P26998 211 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 SELENOTP62341 195 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 UBE2L3P68036 154 aaKnown RBP12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 ASPHD1Q5U4P2 390 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 LINC00305Q7Z4B0 112 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 OR2T10Q8NGZ9 312 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 TRGV9Q99603 122 aa12.87□□□□□ -0.35
SCNN1A-202ENST00000338748 TRBV24-1A0A075B6N3 115 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 NCBP2LA6PVI3 153 aaKnown RBP12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 K7EIM0 57 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 K7EN84 100 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 CORTO00230 105 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 GALR1P47211 349 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 FAM120AOSQ5T036 256 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 MINOS1Q5TGZ0 78 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 OR1B1Q8NGR6 318 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 OCC1Q8TAD7 63 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 PFDN5Q99471 154 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 CCL19Q99731 98 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 MINOS1-NBL1R4GNA1 71 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 POLQO75417 2590 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 SAA4P35542 130 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 BPIFB3P59826 476 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 CX3CL1P78423 397 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 ARL2-SNX15V9GYD0 113 aa12.86□□□□□ -0.35
SCNN1A-202ENST00000338748 SUMO1P63165 101 aaKnown RBP12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 C22orf15Q8WYQ4 148 aa12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 S4R3C0 116 aa12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 IGHV4-61A0A0C4DH41 118 aa12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 UBE2E1P51965 193 aa12.85□□□□□ -0.35
SCNN1A-202ENST00000338748 PHOX2AO14813 284 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 MEOX2P50222 304 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 PDLIM4P50479 330 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 EBI3Q14213 229 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 LEMD1Q68G75 181 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 FXYD5Q96DB9 178 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 SFRP2Q96HF1 295 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 RNF2Q99496 336 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 SRSF8Q9BRL6 282 aaKnown RBP12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 PAXXQ9BUH6 204 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 A0A1W2PPQ1 181 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 OOSP1A8MZH6 123 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 UBE2CO00762 179 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 IGKV1-17P01599 117 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 TMEM11P17152 192 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 NRGNQ92686 78 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 PYGO2Q9BRQ0 406 aa12.84□□□□□ -0.35
SCNN1A-202ENST00000338748 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 PSG1P11464 419 aa12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 TIGITQ495A1 244 aa12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 OR51M1Q9H341 326 aa12.83□□□□□ -0.36
SCNN1A-202ENST00000338748 CENPWQ5EE01 88 aa12.82□□□□□ -0.36
SCNN1A-202ENST00000338748 TEX38Q6PEX7 206 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms