RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SUPT4H1P63272 117 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 C2orf83Q53S99 150 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 FAM219AQ8IW50 185 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 METTL26Q96S19 204 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 SLIRPQ9GZT3 109 aaKnown RBP9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 MCUBQ9NWR8 336 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 FBXL17Q9UF56 701 aa9.75□□□□□ -0.85
NUDCD3-201ENST00000338427 A0A1W2PS18 150 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 NUPR2A6NF83 97 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 FABP12A6NFH5 140 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 GSTZ1O43708 216 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 B3GALNT1O75752 331 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 OR10J1P30954 320 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 TMBIM6P55061 237 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 SURF2Q15527 256 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 USF2Q15853 346 aaPredicted RBP9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 RPP25LQ8N5L8 163 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 SLC24A4Q8NFF2 622 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 Q8WTZ3 238 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 RAB2BQ8WUD1 216 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 ACY3Q96HD9 319 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 RBKSQ9H477 322 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 CLEC5AQ9NY25 188 aa9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 CCDC59Q9P031 241 aaKnown RBP9.74□□□□□ -0.85
NUDCD3-201ENST00000338427 H3BMQ9 156 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 DEDDO75618 318 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 RBMY1A1P0DJD3 496 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 RBMY1CP0DJD4 496 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 SULT1A3P0DMM9 295 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 SULT1A4P0DMN0 295 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 DEFB1P60022 68 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 RBMY1FQ15415 496 aaKnown RBP9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 ACTL10Q5JWF8 245 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 C16orf54Q6UWD8 224 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 STHQ8IWL8 128 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 OR1S2Q8NGQ3 325 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 C11orf45Q8TAV5 145 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 GATAD1Q8WUU5 269 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 PRRT1Q99946 306 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 KCNIP3Q9Y2W7 256 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
NUDCD3-201ENST00000338427 TRAV30A0A087WSZ9 112 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 TRAV2A0A0B4J234 112 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 RPS10-NUDT3A0A1W2PQS6 291 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 IFNA10P01566 189 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 CD5P06127 495 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 HNRNPCP07910 306 aaKnown RBP eCLIP9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 C4BPBP20851 252 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 NPY1RP25929 384 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 DHRS2Q13268 280 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 NMSQ5H8A3 153 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 TRPT1Q86TN4 253 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 RNASEH2CQ8TDP1 164 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 GLMPQ8WWB7 406 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 RAB40CQ96S21 281 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 TMEM231Q9H6L2 316 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 RSL24D1Q9UHA3 163 aaKnown RBP9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 SCP2D1Q9UJQ7 156 aa9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
NUDCD3-201ENST00000338427 IL4P05112 153 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 RD3LP0DJH9 198 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 PSG1P11464 419 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 SLC25A4P12235 298 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 ATF4P18848 351 aaPredicted RBP9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 YPEL3P61236 119 aaPredicted RBP9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 TMEM217Q8N7C4 229 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 OR51G1Q8NGK1 321 aa9.71□□□□□ -0.86
NUDCD3-201ENST00000338427 CCR6P51684 374 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 ZNF90Q03938 601 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 KLF9Q13886 244 aaPredicted RBP9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 SMCO1Q147U7 214 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 PYDC2Q56P42 97 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 PSMG4Q5JS54 123 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 TMED4Q7Z7H5 227 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 LGI3Q8N145 548 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 Q8NAQ8 132 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 DTD1Q8TEA8 209 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 IL22RA2Q969J5 263 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 HSPB7Q9UBY9 170 aa9.7□□□□□ -0.86
NUDCD3-201ENST00000338427 IGKV1D-37A0A075B6S9 117 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 ELOA3CA0A087WX78 387 aaPredicted RBP9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 A0A0B4J2A0 478 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 IGHV4-28A0A0C4DH34 117 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 BUB3O43684 328 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 TOMM40O96008 361 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 IFNA4P05014 189 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 IAPPP10997 89 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 PRR20EP86478 221 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 PRR20CP86479 221 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 PRR20DP86480 221 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 PRR20BP86481 221 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 PRR20AP86496 221 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 OR2F1Q13607 317 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 GAMTQ14353 236 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 CSNK1G2-AS1Q8NCQ2 148 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 OR1S1Q8NH92 325 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 GRAMD2BQ96HH9 432 aa9.69□□□□□ -0.86
NUDCD3-201ENST00000338427 NARS2Q96I59 477 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms