RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 BCL6BQ8N143 479 aaPredicted RBP10.89□□□□□ -0.67
HLCS-201ENST00000336648 MLNRO43193 412 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 UMODP07911 640 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 LHX2P50458 406 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 VGLL1Q99990 258 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BKO60814 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BJP06899 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BOP23527 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BBP33778 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BDP58876 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BCP62807 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST2H2BEQ16778 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 CD300EQ496F6 205 aaPredicted RBP10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.88□□□□□ -0.67
HLCS-201ENST00000336648 ZNF362Q5T0B9 420 aaPredicted RBP10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BHQ93079 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BNQ99877 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BMQ99879 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 SSC4DQ8WTU2 575 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
HLCS-201ENST00000336648 ADAMTS7Q9UKP4 1686 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 TRAV1-1A0A0B4J248 108 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 ZNFX1Q9P2E3 1918 aaKnown RBP10.88□□□□□ -0.67
HLCS-201ENST00000336648 STRCP1A6NGW2 1772 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 TRBV24-1A0A075B6N3 115 aa10.88□□□□□ -0.67
HLCS-201ENST00000336648 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 TEX38Q6PEX7 206 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 IGHV3-64A0A075B6Q5 118 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 TBX6O95947 436 aaPredicted RBP10.87□□□□□ -0.67
HLCS-201ENST00000336648 DUTP33316 252 aaKnown RBP10.87□□□□□ -0.67
HLCS-201ENST00000336648 LAGE3Q14657 143 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 THBDP07204 575 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 SLC25A28Q96A46 364 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 SPANXCQ9NY87 97 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 S4R3C0 116 aa10.87□□□□□ -0.67
HLCS-201ENST00000336648 TRGV4A0A0C4DH28 118 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 SMAD7O15105 426 aaKnown RBP10.86□□□□□ -0.67
HLCS-201ENST00000336648 WNT2P09544 360 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 EFNB3Q15768 340 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 C9orf106Q8NAJ2 232 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 PAX4O43316 350 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 NPC2P61916 151 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 GTSCR1Q86UQ5 136 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 LY96Q9Y6Y9 160 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 COL24A1Q17RW2 1714 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 HTN3P15516 51 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 TMEM258P61165 79 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 ATRAIDQ6UW56 229 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 HIST3H2BBQ8N257 126 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 NAA38Q9BRA0 125 aaKnown RBP10.86□□□□□ -0.67
HLCS-201ENST00000336648 TRAV8-3A0A0A6YYJ7 113 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 A0A0U1RRA0 63 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 C1QTNF9P0C862 333 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 PSG1P11464 419 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 GATA2P23769 480 aaPredicted RBP10.86□□□□□ -0.67
HLCS-201ENST00000336648 PAX8Q06710 450 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 FAM201AQ5SY85 155 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 CSRP1P21291 193 aaKnown RBP10.86□□□□□ -0.67
HLCS-201ENST00000336648 FOXL1Q12952 345 aa10.86□□□□□ -0.67
HLCS-201ENST00000336648 PLXNB2O15031 1838 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 GNG5P63218 68 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 CFHR1Q03591 330 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 PRADC1Q9BSG0 188 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 IGKV1D-13A0A0B4J2D9 117 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 IL18BPO95998 194 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 IGKV1-13P0DP09 117 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 SPSB3Q6PJ21 355 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 ANAPC10Q9UM13 185 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 CCDC88CQ9P219 2028 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 EVI2AP22794 236 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
HLCS-201ENST00000336648 C1QL4Q86Z23 238 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 KIAA1217Q5T5P2 1943 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 E9PLN8 166 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 RASL10AQ92737 203 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 IGHV3-11P01762 117 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 LY6G6FQ5SQ64 297 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
HLCS-201ENST00000336648 TGFBR3LH3BV60 316 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 LEPROTO15243 131 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 CCL3L1P16619 93 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
HLCS-201ENST00000336648 MINOS1Q5TGZ0 78 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 SIGLEC15Q6ZMC9 328 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 OCC1Q8TAD7 63 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 MINOS1-NBL1R4GNA1 71 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 BTCP35070 178 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 EPOPA6NHQ4 379 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 HEPN1Q6WQI6 88 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 DNAJC13O75165 2243 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 KIR3DS1Q14943 382 aa10.84□□□□□ -0.67
HLCS-201ENST00000336648 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 INS-IGF2F8WCM5 200 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 H3BMM0 161 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 INSP01308 110 aa10.83□□□□□ -0.68
HLCS-201ENST00000336648 UBE2WQ96B02 151 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms