RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CD69Q07108 199 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.05□□□□□ -0.32
SYNM-201ENST00000328642 OCC1Q8TAD7 63 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 BPESC1Q9GZL8 116 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 LOC400499M0QZD8 3231 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 FOXA3P55318 350 aaPredicted RBP13.05□□□□□ -0.32
SYNM-201ENST00000328642 ZNF726P1Q15940 193 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 Q6ZSR3 168 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 SLC25A48Q6ZT89 311 aaKnown RBP13.05□□□□□ -0.32
SYNM-201ENST00000328642 LINC00518Q8N0U6 118 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 SEC14L6B5MCN3 397 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 SELENOTP62341 195 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 SFRP2Q96HF1 295 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 CEACAM4O75871 244 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 SOD3P08294 240 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 PGLYRP4Q96LB8 373 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 C7orf69Q9H7B7 122 aa13.05□□□□□ -0.32
SYNM-201ENST00000328642 DSCAMO60469 2012 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 TMEM250H0YL14 139 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 SSX8Q7RTT4 187 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 NUP37Q8NFH4 326 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 C5orf30Q96GV9 206 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 NDFIP1Q9BT67 221 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 TNRC18O15417 2968 aaPredicted RBP13.04□□□□□ -0.32
SYNM-201ENST00000328642 CFAP47Q6ZTR5 3102 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 NPIPB11E5RHQ5 1161 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 LOXP28300 417 aaPredicted RBP13.04□□□□□ -0.32
SYNM-201ENST00000328642 LOXL3P58215 753 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 ZNF586Q9NXT0 402 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 IGHV1-3A0A0C4DH29 117 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 NEU1Q99519 415 aa13.04□□□□□ -0.32
SYNM-201ENST00000328642 SMAD7O15105 426 aaKnown RBP13.03□□□□□ -0.32
SYNM-201ENST00000328642 PRB1P04280 392 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 RPL29P47914 159 aaKnown RBP13.03□□□□□ -0.32
SYNM-201ENST00000328642 HCFC1P51610 2035 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 ZMAT5Q9UDW3 170 aaKnown RBP13.03□□□□□ -0.32
SYNM-201ENST00000328642 ARL2-SNX15V9GYD0 113 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 FLNBO75369 2602 aaKnown RBP13.03□□□□□ -0.32
SYNM-201ENST00000328642 GOSR1O95249 250 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 TMEM177Q53S58 311 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 IGFL4Q6B9Z1 124 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 FAM168AQ92567 244 aa13.03□□□□□ -0.32
SYNM-201ENST00000328642 TRAV40A0A0B4J280 105 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 LOC389332A0A1B0GUA5 103 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 IGKV3-20P01619 116 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 BPIFA4PQ86YQ2 179 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 OR52E5Q8NH55 327 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 PAM16Q9Y3D7 125 aa13.02□□□□□ -0.32
SYNM-201ENST00000328642 TGFAP01135 160 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 ELOBQ15370 118 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 NOL4LQ96MY1 436 aaPredicted RBP13.02□□□□□ -0.33
SYNM-201ENST00000328642 FBXL7Q9UJT9 491 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 UFC1Q9Y3C8 167 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 HSBP1L1C9JCN9 74 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 TPPP2P59282 170 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 VN1R17PQ8TDU5 208 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 MBD3L1Q8WWY6 194 aa13.02□□□□□ -0.33
SYNM-201ENST00000328642 MFAP4P55083 255 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 TRAV8-1A0A0A6YYK1 113 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 COX6B1P14854 86 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 CLEC19AQ6UXS0 136 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 RNF2Q99496 336 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 NBR2O15453 112 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 CD33P20138 364 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 MRPL18Q9H0U6 180 aaKnown RBP13.01□□□□□ -0.33
SYNM-201ENST00000328642 WDFY3Q8IZQ1 3526 aa13.01□□□□□ -0.33
SYNM-201ENST00000328642 PRRC2AP48634 2157 aaKnown RBP13□□□□□ -0.33
SYNM-201ENST00000328642 IGLV2-14P01704 120 aa13□□□□□ -0.33
SYNM-201ENST00000328642 GBGT1Q8N5D6 347 aa13□□□□□ -0.33
SYNM-201ENST00000328642 C5orf17Q8NAS9 161 aa13□□□□□ -0.33
SYNM-201ENST00000328642 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
SYNM-201ENST00000328642 DMXL2Q8TDJ6 3036 aa13□□□□□ -0.33
SYNM-201ENST00000328642 A0A1W2PPI3 338 aa13□□□□□ -0.33
SYNM-201ENST00000328642 FAM169BQ8N8A8 192 aa13□□□□□ -0.33
SYNM-201ENST00000328642 SHISA9B4DS77 424 aa13□□□□□ -0.33
SYNM-201ENST00000328642 PROP1O75360 226 aa13□□□□□ -0.33
SYNM-201ENST00000328642 SRP14P37108 136 aaKnown RBP13□□□□□ -0.33
SYNM-201ENST00000328642 PDLIM4P50479 330 aa13□□□□□ -0.33
SYNM-201ENST00000328642 PRSS8Q16651 343 aa13□□□□□ -0.33
SYNM-201ENST00000328642 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
SYNM-201ENST00000328642 ATOH7Q8N100 152 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 C11orf44Q8N8P7 122 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 STXBP6Q8NFX7 210 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 PRSS3P2Q8NHM4 247 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 CHRDL1Q9BU40 450 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 PITPNC1Q9UKF7 332 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 YTHDF2Q9Y5A9 579 aaKnown RBP12.99□□□□□ -0.33
SYNM-201ENST00000328642 ST6GALNAC3Q8NDV1 305 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 ARPC1AQ92747 370 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 HSPB9Q9BQS6 159 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
SYNM-201ENST00000328642 SRIP30626 198 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 FAM90A2PQ658T7 463 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 RITA1Q96K30 269 aa12.99□□□□□ -0.33
SYNM-201ENST00000328642 BUB1B-PAK6H3BSN5 160 aa12.98□□□□□ -0.33
SYNM-201ENST00000328642 SCRT1Q9BWW7 348 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms