RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CCDC168Q8NDH2 2452 aa6.24□□□□□ -1.41
CDHR3-201ENST00000317716 TRAV8-1A0A0A6YYK1 113 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 TRBV9A0A0B4J1U6 114 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 PINLYPA6NC86 204 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF716A6NP11 495 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 FOXI3A8MTJ6 420 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 CIDEAO60543 219 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ORM1P02763 201 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 RPL15P61313 204 aaKnown RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 CCL8P80075 99 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 PSG7Q13046 419 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 RIPPLY2Q5TAB7 128 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 FBXW9Q5XUX1 488 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 FADS6Q8N9I5 356 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 TXNDC17Q9BRA2 123 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF106Q9H2Y7 1883 aaKnown RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 IZUMO1RA6ND01 250 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ZZEF1O43149 2961 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 SLC25A17O43808 307 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 CRYABP02511 175 aaKnown RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 CD40P25942 277 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 PSG9Q00887 426 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 LCNL1Q6ZST4 164 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 TTTY12Q9BZ98 90 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ZNRD1Q9P1U0 126 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 MRPS18CQ9Y3D5 142 aaKnown RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 DYSFO75923 2080 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 MUC22E2RYF6 1773 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 H7C2G1 150 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 PEX7O00628 323 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ADH4P08319 380 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 MZT1Q08AG7 82 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 VWC2Q2TAL6 325 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 LINC00305Q7Z4B0 112 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 ODF3L1Q8IXM7 274 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 OR1N2Q8NGR9 330 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 OR10AG1Q8NH19 301 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 SNRNP40Q96DI7 357 aaKnown RBP6.23□□□□□ -1.41
CDHR3-201ENST00000317716 DECR2Q9NUI1 292 aa6.23□□□□□ -1.41
CDHR3-201ENST00000317716 CGB1A6NKQ9 187 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 K7EN84 100 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 GAGE1Q13065 139 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 SSPNQ14714 243 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF497Q6ZNH5 498 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 Q6ZPA2 131 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 OR52E5Q8NH55 327 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 DEFB104AQ8WTQ1 72 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 FAM168AQ92567 244 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 PERPQ96FX8 193 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 CALYQ9NYX4 217 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 PRNDQ9UKY0 176 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 DSCAML1Q8TD84 2053 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 MAP1AP78559 2803 aaPredicted RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 IGHV1-69-2A0A0G2JMI3 117 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 A1L4Q6 167 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 RPL11P62913 178 aaKnown RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 RNPS1Q15287 305 aaKnown RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 SLC25A53Q5H9E4 307 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 COA6Q5JTJ3 125 aaKnown RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 MBNL2Q5VZF2 373 aaKnown RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 PRSS57Q6UWY2 283 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 LINC00173Q6ZV60 143 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 OR2K2Q8NGT1 345 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 C18orf32Q8TCD1 76 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 PKIBQ9C010 78 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 NHP2Q9NX24 153 aaKnown RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 KLF13Q9Y2Y9 288 aaPredicted RBP6.22□□□□□ -1.41
CDHR3-201ENST00000317716 KIAA1549Q9HCM3 1950 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 LOC102723996A0A087X1L8 192 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 CACNG7P62955 275 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 CX3CL1P78423 397 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 TMEM97Q5BJF2 176 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 SCGB1D4Q6XE38 83 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 PYGO2Q9BRQ0 406 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 TNFRSF19Q9NS68 423 aa6.22□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF462Q96JM2 2506 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 IGKV3-7A0A075B6H7 116 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 IGHV2OR16-5A0A0B4J2B6 119 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 CLEC3BP05452 202 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 LIPFP07098 398 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 ZNF883P0CG24 379 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 CKS2P33552 79 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 RIGQ13278 110 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 TMEM42Q69YG0 159 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 TMEM136Q6ZRR5 245 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 FAM169BQ8N8A8 192 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 NUP35Q8NFH5 326 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 ITLN1Q8WWA0 313 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 RNF114Q9Y508 228 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 CSPG4Q6UVK1 2322 aa6.21□□□□□ -1.41
CDHR3-201ENST00000317716 TRAV30A0A087WSZ9 112 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 ZNF766Q5HY98 468 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 TEX45Q8NA69 505 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 OR4F17Q8NGA8 305 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 OR1L8Q8NGR8 309 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 TMUB1Q9BVT8 246 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV3OR16-13A0A075B7E8 117 aa6.21□□□□□ -1.42
CDHR3-201ENST00000317716 IGHV3-74A0A0B4J1X5 117 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms