RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 DEFB103AP81534 67 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 IL15RAQ13261 267 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 C1orf61Q13536 156 aa3.81□□□□□ -1.8
CNOT1-201ENST00000317147 GEMIN7Q9H840 131 aaKnown RBP3.81□□□□□ -1.8
CNOT1-201ENST00000317147 H3BUT2 72 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 CCL5P13501 91 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 Q6ZS92 163 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 HIGD1BQ9P298 99 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 KLF12Q9Y4X4 402 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 TNRC6BQ9UPQ9 1833 aaKnown RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 PROB1E7EW31 1015 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 IGKV3-11P04433 115 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 LGALS3P17931 250 aaKnown RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 NABP2Q9BQ15 211 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 RNF186Q9NXI6 227 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 TCF19Q9Y242 345 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 OR2H2O95918 312 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 PIGYQ3MUY2 71 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 C1orf162Q8NEQ5 155 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 OR1B1Q8NGR6 318 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 ZPLD1Q8TCW7 415 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 C15orf61A6NNL5 157 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 PLAUP00749 431 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 SSBP2P81877 361 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 VKORC1L1Q8N0U8 176 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 HRKO00198 91 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 GDF9O60383 454 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 PAX1P15863 534 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 CXCL12P48061 93 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 ZAR1Q86SH2 424 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 SSMEM1Q8WWF3 244 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 NSD1Q96L73 2696 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 hCG_38984A0A1B0GV85 526 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 GOSR1O95249 250 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 VPREB1P12018 145 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 SPXQ9BT56 116 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 NPIPB6E9PJ23 425 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF418Q8TF45 676 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 PROCRQ9UNN8 238 aa3.8□□□□□ -1.8
CNOT1-201ENST00000317147 FOXA2Q9Y261 457 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE12HA6NDE8 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 CT62P0C5K7 136 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 MAJINQ3KP22 176 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 MAFAQ8NHW3 353 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 H1FXQ92522 213 aaKnown RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 C21orf140B9A014 251 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 PPIAL4DF5H284 164 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SLC25A20O43772 301 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 LYPD3O95274 346 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 PEBP1P30086 187 aaKnown RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM42Q69YG0 159 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SPSB2Q99619 263 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 A0A1W2PS18 150 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 HOXA3O43365 443 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 EGR4Q05215 589 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE5Q13069 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE6Q13070 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 KIR3DS1Q14943 382 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 ATXN8Q156A1 80 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 PCSK4Q6UW60 755 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SSBP3Q9BWW4 388 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 H3BMG7 143 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 HAX1O00165 279 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SMAD7O15105 426 aaKnown RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 MLNRO43193 412 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 MT-CO3P00414 261 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 KLRD1Q13241 179 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 PVRIGQ6DKI7 326 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 TBX6O95947 436 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SELLP14151 372 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 MFAP4P55083 255 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 ZNF585BQ52M93 769 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 C1orf185Q5T7R7 199 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 DEFB119Q8N690 84 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM171Q8WVE6 324 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 IFI27L1Q96BM0 104 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 WNT10AQ9GZT5 417 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 RAXQ9Y2V3 346 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 A0A1W2PPM0 123 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE12JA6NER3 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 IQCF6A8MYZ5 107 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 FAM157AC9JC47 383 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE7O76087 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 IGHG4P01861 327 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SLC25A16P16260 332 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 DUTP33316 252 aaKnown RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 ID1P41134 155 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GAGE4Q13068 117 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SMAD4Q13485 552 aaKnown RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 PPP1R27Q86WC6 154 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 GLMPQ8WWB7 406 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 SMIM27A0A1W2PRY6 76 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 ETV2O00321 342 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-201ENST00000317147 ZG16O60844 167 aa3.79□□□□□ -1.8
CNOT1-201ENST00000317147 IGKCP01834 107 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms