RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 ARL6IP6Q8N6S5 226 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 LINC00479Q96M42 142 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 OR2V2Q96R30 315 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 CLPSL1A2RUU4 121 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 K7EIM0 57 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 SLC17A3O00476 420 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 IGKV1-17P01599 117 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 S100A6P06703 90 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 GPR12P47775 334 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 ACOT6Q3I5F7 207 aaPredicted RBP6.13□□□□□ -1.43
CNOT4-201ENST00000315544 LYPD2Q6UXB3 125 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 APRG1Q8IVJ8 170 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 DEFB127Q9H1M4 99 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 UFSP2Q9NUQ7 469 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 VSTM5A8MXK1 200 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 HYPMO75409 117 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 CRYAAP02489 173 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 BHLHA15Q7RTS1 189 aaPredicted RBP6.13□□□□□ -1.43
CNOT4-201ENST00000315544 MUC15Q8N387 334 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 MIEN1Q9BRT3 115 aa6.13□□□□□ -1.43
CNOT4-201ENST00000315544 PRRC2AP48634 2157 aaKnown RBP6.13□□□□□ -1.43
CNOT4-201ENST00000315544 FAM231BA6NCW3 169 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 M0R036 132 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 IRF2P14316 349 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 OR10P1Q8NGE3 313 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 C18orf15Q96N68 181 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 PSG11Q9UQ72 335 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 ATRXP46100 2492 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 CHD8Q9HCK8 2581 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 IGHV3-43A0A0B4J1X8 118 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 CENPVL3A0A0U1RRI6 287 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 CEBPZOSA8MTT3 80 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 CORTO00230 105 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SERPINE2P07093 398 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 IGLC1P0CG04 106 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 IGHV3-43DP0DP04 118 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 PRRX1P54821 245 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SMIM21Q3B7S5 101 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 ANKRD39Q53RE8 183 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 UFSP1Q6NVU6 142 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SLC24A4Q8NFF2 622 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 NUP35Q8NFH5 326 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 OSR1Q8TAX0 266 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-201ENST00000315544 FAM104AQ969W3 186 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 FANCD2OSQ96PS1 177 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 TRGV9Q99603 122 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 COMMD5Q9GZQ3 224 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 TRAPPC2LQ9UL33 140 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 TRAV5A0A0B4J249 113 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 PPP1R2P9O14990 202 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 THBS3P49746 956 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 RELQ04864 619 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SRYQ05066 204 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SPINK9Q5DT21 86 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SIGLEC15Q6ZMC9 328 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 RNF152Q8N8N0 203 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 PHLDA1Q8WV24 401 aaPredicted RBP6.12□□□□□ -1.43
CNOT4-201ENST00000315544 LEAP2Q969E1 77 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 SARAFQ96BY9 339 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
CNOT4-201ENST00000315544 LPAR2Q9HBW0 351 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 TP73-AS1Q9UF72 201 aa6.12□□□□□ -1.43
CNOT4-201ENST00000315544 TCRBV4S1A1TA0A5B7 111 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
CNOT4-201ENST00000315544 HLA-DRB1P01911 266 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 ZNF90Q03938 601 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 NEU4Q8WWR8 484 aaPredicted RBP6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TMEM190Q8WZ59 177 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TMEM68Q96MH6 324 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 NDFIP1Q9BT67 221 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TNFRSF19Q9NS68 423 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 ZNF586Q9NXT0 402 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 U3KQE9 123 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 IZUMO1RA6ND01 250 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 HAX1O00165 279 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 CBLN1P23435 193 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 CD40P25942 277 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TEPPQ6URK8 271 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 LINC00696Q6ZRV3 163 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 KCNS1Q96KK3 526 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TMEM208Q9BTX3 173 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 SCRT2Q9NQ03 307 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 NACAE9PAV3 2078 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 CNOT1A5YKK6 2376 aaKnown RBP6.11□□□□□ -1.43
CNOT4-201ENST00000315544 A0A1B0GV50 99 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 TRAPPC6AO75865 159 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 FSHBP01225 129 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 CENPWQ5EE01 88 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 FAM216BQ8N7L0 139 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 STPG4Q8N801 248 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 MRPL20Q9BYC9 149 aaKnown RBP6.11□□□□□ -1.43
CNOT4-201ENST00000315544 NAGKQ9UJ70 344 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 ZGRF1Q86YA3 2104 aa6.11□□□□□ -1.43
CNOT4-201ENST00000315544 ARHGAP32A7KAX9 2087 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 FOSL1P15407 271 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 ATP5L2Q7Z4Y8 100 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms