RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 IGHG3P01860 377 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 HES1Q14469 280 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 ZBTB34Q8NCN2 500 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 MRPL20Q9BYC9 149 aaKnown RBP11.92□□□□□ -0.5
PTPN9-201ENST00000306726 UQCR10Q9UDW1 63 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 SONP18583 2426 aaKnown RBP11.92□□□□□ -0.5
PTPN9-201ENST00000306726 IGHV3OR16-13A0A075B7E8 117 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 IGHV3-74A0A0B4J1X5 117 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 IGHV2OR16-5A0A0B4J2B6 119 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 SRRM4A7MD48 611 aaKnown RBP11.92□□□□□ -0.5
PTPN9-201ENST00000306726 PPOXP50336 477 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 PYGO2Q9BRQ0 406 aa11.92□□□□□ -0.5
PTPN9-201ENST00000306726 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
PTPN9-201ENST00000306726 ZNF324O75467 553 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-201ENST00000306726 SAA1P0DJI8 122 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-201ENST00000306726 FOXL1Q12952 345 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 SARAFQ96BY9 339 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 DYNLRB1Q9NP97 96 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 HTR1DP28221 377 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 C11orf53Q8IXP5 236 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 ABHD17AQ96GS6 310 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 COL8A1P27658 744 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 ERVK11-1P61568 191 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 MPV17L2Q567V2 206 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 BHLHA15Q7RTS1 189 aaPredicted RBP11.91□□□□□ -0.5
PTPN9-201ENST00000306726 FAM222BQ8WU58 562 aa11.91□□□□□ -0.5
PTPN9-201ENST00000306726 J3KRW8 73 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 HYPMO75409 117 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 LINC00305Q7Z4B0 112 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 KLHDC1Q8N7A1 406 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 TLN2Q9Y4G6 2542 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 SPTBN4Q9H254 2564 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 C8orf88P0DMB2 117 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 KLRB1Q12918 225 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 Q6ZSR3 168 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 PDPNQ86YL7 162 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 TMEM167BQ9NRX6 74 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 F11RQ9Y624 299 aaKnown RBP11.9□□□□□ -0.5
PTPN9-201ENST00000306726 IGHV3-23P01764 117 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 MSMPQ1L6U9 139 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 OR4B1Q8NGF8 309 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 PARD6GQ9BYG4 376 aaPredicted RBP11.9□□□□□ -0.5
PTPN9-201ENST00000306726 HILPDAQ9Y5L2 63 aa11.9□□□□□ -0.5
PTPN9-201ENST00000306726 IGKV1OR2-108A0A075B7D4 117 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 IQCF6A8MYZ5 107 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 IGHV1-18A0A0C4DH31 117 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 Q6ZT83 130 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 FAM90A1Q86YD7 464 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 M0QZK8 103 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 AMY1AP04745 511 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 FAM87AP0C7U9 286 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 Q8NFD4 153 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
PTPN9-201ENST00000306726 IFI27L2Q9H2X8 130 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 IDI2-AS1Q9NZ38 188 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 V9GYV3 84 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 RELNP78509 3460 aa11.89□□□□□ -0.51
PTPN9-201ENST00000306726 A0A087X0K7 114 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 TMEM210A6NLX4 147 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 KIR2DL2P43627 348 aaPredicted RBP11.88□□□□□ -0.51
PTPN9-201ENST00000306726 FAM208BQ5VWN6 2430 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 E7EUB6 86 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 P01737 135 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 GOLT1AQ6ZVE7 132 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 CGB1A6NKQ9 187 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 FCER1GP30273 86 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 WDR73Q6P4I2 378 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 C1orf174Q8IYL3 243 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 PRSS3P2Q8NHM4 247 aa11.88□□□□□ -0.51
PTPN9-201ENST00000306726 ASH1LQ9NR48 2969 aaKnown RBP11.88□□□□□ -0.51
PTPN9-201ENST00000306726 C15orf61A6NNL5 157 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 CD99P14209 185 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 LINC00310P59036 64 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 RBPJQ06330 500 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 KRTAP27-1Q3LI81 207 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 LDLRAD2Q5SZI1 272 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 TPSG1Q9NRR2 321 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 MPDU1O75352 247 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 OR5AL1P0C617 328 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
PTPN9-201ENST00000306726 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 LEPROTL1O95214 131 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 TNFSF4P23510 183 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 CEACAM8P31997 349 aaPredicted RBP11.87□□□□□ -0.51
PTPN9-201ENST00000306726 COMPP49747 757 aaPredicted RBP11.87□□□□□ -0.51
PTPN9-201ENST00000306726 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 ZNF738Q8NE65 137 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 TET2Q6N021 2002 aaPredicted RBP11.87□□□□□ -0.51
PTPN9-201ENST00000306726 MYO9AB2RTY4 2548 aa11.87□□□□□ -0.51
PTPN9-201ENST00000306726 TRBV6-6A0A0A6YYG2 114 aa11.86□□□□□ -0.51
PTPN9-201ENST00000306726 TEX50A0A1B0GTY4 177 aa11.86□□□□□ -0.51
PTPN9-201ENST00000306726 PPIAL4DF5H284 164 aa11.86□□□□□ -0.51
PTPN9-201ENST00000306726 KLF17Q5JT82 389 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms