RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 KIR3DP1A8MWS1 328 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 TMEM170AQ8WVE7 144 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 Q96M66 194 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 NEUROG3Q9Y4Z2 214 aa11.28□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A10PA6NDY2 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A18PA6NE21 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE12JA6NER3 117 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A16PA6NEW6 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE1Q13065 139 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE4Q13068 117 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE5Q13069 117 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE6Q13070 117 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 Q5BKY6 102 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 RPP25Q9BUL9 199 aaKnown RBP11.27□□□□□ -0.6
TRIM56-201ENST00000306085 GAGE12BA1L429 117 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 ZIC1Q15915 447 aa11.27□□□□□ -0.6
TRIM56-201ENST00000306085 A0A1W2PRE2 83 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 PPBPP02775 128 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 TFF2Q03403 129 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 A0A0J9YW62 118 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 IGHG3P01860 377 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 FXYD7P58549 80 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 PLEKHB2Q96CS7 222 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 SRP19P09132 144 aaKnown RBP11.27□□□□□ -0.61
TRIM56-201ENST00000306085 IFITM1P13164 125 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 A0A1W2PQF6 199 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 INAFM2P0DMQ5 153 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 C1QL4Q86Z23 238 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 SPANXA1Q9NS26 97 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 MLNRO43193 412 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 NABP1Q96AH0 204 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 DENND4AQ7Z401 1863 aa11.27□□□□□ -0.61
TRIM56-201ENST00000306085 SOCS3O14543 225 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BKO60814 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BJP06899 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BOP23527 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BBP33778 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BDP58876 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BCP62807 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST2H2BEQ16778 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BHQ93079 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BNQ99877 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HIST1H2BMQ99879 126 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 CSPG4Q6UVK1 2322 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 CEACAM8P31997 349 aaPredicted RBP11.26□□□□□ -0.61
TRIM56-201ENST00000306085 GNB1LQ9BYB4 327 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 HCFC1P51610 2035 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 SAXO1Q8IYX7 474 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 CHKB-CPT1BH3BT56 60 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 ASPHD2Q6ICH7 369 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 F2Z2F3 143 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 SPRED2Q7Z698 418 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 RASL10AQ92737 203 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 AHRRA9YTQ3 701 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 LILRA1O75019 489 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 hDV102S1A0JD36 115 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 PRR31Q5SQ13 230 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 COLCA1Q6ZS62 124 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 OR13A1Q8NGR1 328 aa11.26□□□□□ -0.61
TRIM56-201ENST00000306085 THAP8Q8NA92 274 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 BAALCQ8WXS3 180 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 FAM168AQ92567 244 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 PPP1R3EQ9H7J1 279 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 FHL5Q5TD97 284 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 C11orf44Q8N8P7 122 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 LHFPL6Q9Y693 200 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 TRGV1A0A0A0MS02 117 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 TMEM30BQ3MIR4 351 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
TRIM56-201ENST00000306085 CARHSP1Q9Y2V2 147 aaKnown RBP11.25□□□□□ -0.61
TRIM56-201ENST00000306085 C1QTNF9P0C862 333 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 CRYBA2P53672 197 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 IGKV1D-16P01601 117 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 COX14Q96I36 57 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 UCNP55089 124 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 HAMPP81172 84 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 DSCR8Q96T75 97 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 NRN1LQ496H8 165 aa11.25□□□□□ -0.61
TRIM56-201ENST00000306085 A0A1W2PPI3 338 aa11.24□□□□□ -0.61
TRIM56-201ENST00000306085 NPDC1Q9NQX5 325 aaPredicted RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
TRIM56-201ENST00000306085 CD5P06127 495 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms