RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 YTHDF2Q9Y5A9 579 aaKnown RBP8.98□□□□□ -0.97
LSM3-201ENST00000306024 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.98□□□□□ -0.97
LSM3-201ENST00000306024 CCL8P80075 99 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 SP5Q6BEB4 398 aaPredicted RBP8.98□□□□□ -0.97
LSM3-201ENST00000306024 MOB1BQ7L9L4 216 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 LRRC29Q8WV35 223 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
LSM3-201ENST00000306024 FCGR3BO75015 233 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 TNFRSF1AP19438 455 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 ZNF826PQ6ZT77 177 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 RFESDQ8TAC1 157 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 FAM216AQ8WUB2 273 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 THYN1Q9P016 225 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 GNG12Q9UBI6 72 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 SH2D7A6NKC9 451 aaPredicted RBP8.97□□□□□ -0.97
LSM3-201ENST00000306024 DEFB108AA8MXU0 73 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 CLDN14O95500 239 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 NBEAP1P0C6P0 100 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 GATA2P23769 480 aaPredicted RBP8.97□□□□□ -0.97
LSM3-201ENST00000306024 GUSBP1Q15486 140 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 MOGAT3Q86VF5 341 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 MRPL27Q9P0M9 148 aaKnown RBP8.97□□□□□ -0.97
LSM3-201ENST00000306024 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 KIAA1549Q9HCM3 1950 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 IGHV3-43A0A0B4J1X8 118 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 RAMP3O60896 148 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 STAG3L2P0CL84 134 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 STAG3L3P0CL85 134 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 IGHV3-43DP0DP04 118 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 CKS1BP61024 79 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 EDDM3AQ14507 147 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 EBLN2Q6P2I7 272 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 COLCA1Q6ZS62 124 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 FA2HQ7L5A8 372 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 OSTCQ9NRP0 149 aa8.97□□□□□ -0.97
LSM3-201ENST00000306024 C3orf80F5H4A9 247 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 RRHO14718 337 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 AZU1P20160 251 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 RTL8BQ17RB0 113 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 TEPPQ6URK8 271 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 CCL17Q92583 94 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 TPPP3Q9BW30 176 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 RALYQ9UKM9 306 aaKnown RBP8.96□□□□□ -0.97
LSM3-201ENST00000306024 ZNF462Q96JM2 2506 aa8.96□□□□□ -0.97
LSM3-201ENST00000306024 K7EN84 100 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 K7EQM0 130 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 SEC11AP67812 179 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 TM4SF20Q53R12 229 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 CRIP3Q6Q6R5 217 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 Q8IYB0 196 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 ZNF295-AS1Q8N0V1 137 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 PERPQ96FX8 193 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 PSG11Q9UQ72 335 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 ZNF788Q6ZQV5 615 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 OR8A1Q8NGG7 326 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 ITLN1Q8WWA0 313 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 MS4A5Q9H3V2 200 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 NPVFQ9HCQ7 196 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 V9GYV3 84 aa8.96□□□□□ -0.98
LSM3-201ENST00000306024 SAA2-SAA4A0A096LPE2 208 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 A0A0G2JLM5 398 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 UBE2L3P68036 154 aaKnown RBP8.95□□□□□ -0.98
LSM3-201ENST00000306024 SLAQ13239 276 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 ZNF585BQ52M93 769 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 SPATA31B1PQ5VZV4 182 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 ABHD12Q8N2K0 398 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 Q8N976 141 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 ADTRPQ96IZ2 230 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 HS3ST6Q96QI5 342 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 TRGV10A0A0A0MS01 117 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 PPIAL4CA0A0B4J2A2 164 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 C9JCJ5 164 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 REG1AP05451 166 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 PPIAL4GP0DN37 164 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 OPRK1P41145 380 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 PRSS3P2Q8NHM4 247 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 TNFRSF19Q9NS68 423 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 IQCF6A8MYZ5 107 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 SYS1-DBNDD2H3BUS1 97 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 ADH4P08319 380 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 IGLC1P0CG04 106 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 FCER1GP30273 86 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 NMUP48645 174 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 UBTD1Q9HAC8 227 aa8.95□□□□□ -0.98
LSM3-201ENST00000306024 F11RQ9Y624 299 aaKnown RBP8.95□□□□□ -0.98
LSM3-201ENST00000306024 LIPFP07098 398 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 GRNP28799 593 aaKnown RBP8.94□□□□□ -0.98
LSM3-201ENST00000306024 GPR12P47775 334 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 PCSK4Q6UW60 755 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 ASCL4Q6XD76 172 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 WNK2Q9Y3S1 2297 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.94□□□□□ -0.98
LSM3-201ENST00000306024 C17orf98A8MV24 154 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 GCSHP23434 173 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 C20orf204Q6ZNR8 217 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 RAB1CQ92928 201 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 ATP6V0BQ99437 205 aa8.94□□□□□ -0.98
LSM3-201ENST00000306024 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms