RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 GPR146Q96CH1 333 aa12.25□□□□□ -0.45
TRAPPC1-201ENST00000303731 C11orf68Q9H3H3 251 aaKnown RBP12.25□□□□□ -0.45
TRAPPC1-201ENST00000303731 RABAC1Q9UI14 185 aa12.25□□□□□ -0.45
TRAPPC1-201ENST00000303731 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 HELTA6NFD8 242 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 CA1P00915 261 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 ANXA3P12429 323 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 P2RY1P47900 373 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 AP2S1P53680 142 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 DEFB131AP59861 70 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 YPEL3P61236 119 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 SRPXP78539 464 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 EWSR1Q01844 656 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 STHQ8IWL8 128 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 LILRB2Q8N423 598 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 Q8WTZ3 238 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 MFFQ9GZY8 342 aa12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 MRPL36Q9P0J6 103 aaKnown RBP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 EPPK1P58107 5090 aaKnown RBP12.24□□□□□ -0.45
TRAPPC1-201ENST00000303731 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 NPY1RP25929 384 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 OR10J1P30954 320 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 FAUP35544 74 aaKnown RBP12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 CCR6P51684 374 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 RND2P52198 227 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 TMEM187Q14656 261 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 MLANAQ16655 118 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 TIGITQ495A1 244 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 NMSQ5H8A3 153 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 PRSS54Q6PEW0 395 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 STXBP6Q8NFX7 210 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 OR11H2Q8NH07 326 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 U3KQ87 197 aa12.23□□□□□ -0.45
TRAPPC1-201ENST00000303731 A0A0B4J2A0 478 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 FABP12A6NFH5 140 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 K7EQG2 157 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 ATP5IP56385 69 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 LEMD1Q68G75 181 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 SLIRPQ9GZT3 109 aaKnown RBP12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 MCUBQ9NWR8 336 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 SHPKQ9UHJ6 478 aa12.22□□□□□ -0.45
TRAPPC1-201ENST00000303731 H3BMQ9 156 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 LY6G6CO95867 125 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 SPP1P10451 314 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 AP3S2P59780 193 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 SMCO1Q147U7 214 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 MORN3Q6PF18 240 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 SOSTQ9BQB4 213 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 HSPB7Q9UBY9 170 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 U3KQE9 123 aa12.21□□□□□ -0.45
TRAPPC1-201ENST00000303731 IFNA10P01566 189 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 AKR1C4P17516 323 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 TNFSF8P32971 234 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 NUP62P37198 522 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 LGI3Q8N145 548 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 MCFD2Q8NI22 146 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 C11orf45Q8TAV5 145 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 PHLDA1Q8WV24 401 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 SEPSECSQ9HD40 501 aaKnown RBP12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 PFDN2Q9UHV9 154 aa12.2□□□□□ -0.46
TRAPPC1-201ENST00000303731 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 TOMM40O96008 361 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 RBMS2Q15434 407 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 C16orf54Q6UWD8 224 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 TRPT1Q86TN4 253 aaKnown RBP12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 FAM24BQ8N5W8 94 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 DTD1Q8TEA8 209 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 TMEM170AQ8WVE7 144 aa12.19□□□□□ -0.46
TRAPPC1-201ENST00000303731 IFNA4P05014 189 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 IL4P05112 153 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 SNRPD3P62318 126 aaKnown RBP12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 SUPT4H1P63272 117 aaKnown RBP12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 DHRS2Q13268 280 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 GLMPQ8WWB7 406 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 NPIPB3Q92617 1050 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 ACY3Q96HD9 319 aa12.18□□□□□ -0.46
TRAPPC1-201ENST00000303731 ZNF688P0C7X2 276 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 TCTAP57738 103 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 LYZL2Q7Z4W2 148 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 OR1S1Q8NH92 325 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 BIRC6Q9NR09 4857 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 AGRNO00468 2067 aa12.17□□□□□ -0.46
TRAPPC1-201ENST00000303731 NXPH3O95157 252 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 FABP1P07148 127 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 MIFP14174 115 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 GPX4P36969 197 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 KLF9Q13886 244 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 USF2Q15853 346 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 TOMM5Q8N4H5 51 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 OR51G1Q8NGK1 321 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 HRH4Q9H3N8 390 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 RBKSQ9H477 322 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 NRN1Q9NPD7 142 aa12.16□□□□□ -0.46
TRAPPC1-201ENST00000303731 BUB3O43684 328 aa12.15□□□□□ -0.46
TRAPPC1-201ENST00000303731 SLC25A6P12236 298 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms