RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ETFRF1Q6IPR1 90 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 ACSM6Q6P461 480 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 KCNRGQ8N5I3 272 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 KLHL30-AS1Q8NEE0 82 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 ACY3Q96HD9 319 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 SMIM3Q9BZL3 60 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 MFFQ9GZY8 342 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 NPVFQ9HCQ7 196 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 FBXL17Q9UF56 701 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 TGOLN2O43493 480 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 OR2C1O95371 312 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 HSPB1P04792 205 aaKnown RBP7.27□□□□□ -1.25
RFX3-201ENST00000302303 NKX2-5P52952 324 aaPredicted RBP7.27□□□□□ -1.25
RFX3-201ENST00000302303 AP2S1P53680 142 aaPredicted RBP7.27□□□□□ -1.25
RFX3-201ENST00000302303 ZNF345Q14585 488 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 CLINT1Q14677 625 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 ATP6V1FQ16864 119 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 NSUN5P1Q3KNT7 163 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 TIGITQ495A1 244 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 STX12Q86Y82 276 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 C9orf62Q8N4C0 152 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 UBAC2Q8NBM4 344 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 OR11H1Q8NG94 326 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 OR1S2Q8NGQ3 325 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 HYLS1Q96M11 299 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 MGST2Q99735 147 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 TMEM147Q9BVK8 224 aa7.27□□□□□ -1.25
RFX3-201ENST00000302303 CMYA5Q8N3K9 4069 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 IGHV3-35A0A0C4DH35 117 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 BOLA2-SMG1P6H3BVE0 249 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 CCL24O00175 119 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 LINC00869P0C866 280 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 GATA2P23769 480 aaPredicted RBP7.26□□□□□ -1.25
RFX3-201ENST00000302303 OR10J1P30954 320 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 NPBWR1P48145 328 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 HBG1P69891 147 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 HBG2P69892 147 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 OR2F1Q13607 317 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 KLF5Q13887 457 aaPredicted RBP7.26□□□□□ -1.25
RFX3-201ENST00000302303 Q56UQ5 140 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 KHDC1LQ5JSQ8 128 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 UNQ9165/PRO28630Q6UXU0 137 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 C12orf54Q6X4T0 127 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 C3orf56Q8N813 242 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 INO80EQ8NBZ0 244 aaPredicted RBP7.26□□□□□ -1.25
RFX3-201ENST00000302303 OR1N2Q8NGR9 330 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 TRGV9Q99603 122 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 ATP5SQ99766 215 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 WDR61Q9GZS3 305 aaKnown RBP7.26□□□□□ -1.25
RFX3-201ENST00000302303 UQCC1Q9NVA1 299 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 SLC45A2Q9UMX9 530 aa7.26□□□□□ -1.25
RFX3-201ENST00000302303 GNG7O60262 68 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 PFDN1O60925 122 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 GGCTO75223 188 aaKnown RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 SCAF4O95104 1147 aaKnown RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 PSG1P11464 419 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 HOXD3P31249 432 aaPredicted RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 ARL3P36405 182 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 SLURP1P55000 103 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 YPEL3P61236 119 aaPredicted RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 ZFP69Q49AA0 526 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 FAM209BQ5JX69 171 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 RPL7L1Q6DKI1 246 aaKnown RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 SPSB3Q6PJ21 355 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 SHISA2Q6UWI4 295 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 IL34Q6ZMJ4 242 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 ADAMTSL5Q6ZMM2 481 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 TMUB2Q71RG4 321 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 GPHB5Q86YW7 130 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 STPG3Q8N7X2 389 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 DLX4Q92988 240 aaPredicted RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 RCC1LQ96I51 464 aaKnown RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 SLC35E1Q96K37 410 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 PARD6GQ9BYG4 376 aaPredicted RBP7.25□□□□□ -1.25
RFX3-201ENST00000302303 ARV1Q9H2C2 271 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
RFX3-201ENST00000302303 TRAV30A0A087WSZ9 112 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 A0A0D9SG52 128 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 UBE2L5PA0A1B0GUS4 154 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 WI2-2373I1.2A0A1W2PRP0 233 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 NUDT19A8MXV4 375 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 LINC01619G3V211 115 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 AGPAT2O15120 278 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 TSPAN15O95858 294 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 EDN2P20800 178 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PRR20EP86478 221 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PRR20CP86479 221 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PRR20DP86480 221 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PRR20BP86481 221 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PRR20AP86496 221 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 ZNF616Q08AN1 781 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 TEPPQ6URK8 271 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 BTNL8Q6UX41 500 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 TOMM20LQ6UXN7 152 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 LILRB2Q8N423 598 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 GGTLC1Q9BX51 225 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 PLA2G2EQ9NZK7 142 aa7.24□□□□□ -1.25
RFX3-201ENST00000302303 IGHV3OR16-8A0A075B7F1 116 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms