RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 PVRIGQ6DKI7 326 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 Q6ZWC4 215 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 FAM219AQ8IW50 185 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 OR51S1Q8NGJ8 323 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 OR2T35Q8NGX2 323 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.55□□□□□ -0.24
TMEM88-201ENST00000301599 KIR2DL5BA0A0G2JN68 375 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 KIR2DL5BA0A0G2JPC4 375 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 BMI1P35226 326 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 HOXA1P49639 335 aaPredicted RBP13.54□□□□□ -0.24
TMEM88-201ENST00000301599 DHODHQ02127 395 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 TOMM20LQ6UXN7 152 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 KIR2DL5AQ8N109 375 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 STPG3Q8N7X2 389 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 KIR2DL5BQ8NHK3 375 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 GLYATL2Q8WU03 294 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 GALNT14Q96FL9 552 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 GPR132Q9UNW8 380 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 TP53TG1Q9Y2A0 90 aa13.54□□□□□ -0.24
TMEM88-201ENST00000301599 CSMD3Q7Z407 3707 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 IGHV3-49A0A0A0MS15 119 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 HMSDA8MTL9 139 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 SPRY2O43597 315 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 OR5AC1P0C628 307 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 RNASE2P10153 161 aaKnown RBP13.53□□□□□ -0.24
TMEM88-201ENST00000301599 SPCS3P61009 180 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 FAAP20Q6NZ36 180 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 ZNF600Q6ZNG1 722 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 WFDC3Q8IUB2 231 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 FLVCR2Q9UPI3 526 aa13.53□□□□□ -0.24
TMEM88-201ENST00000301599 A0A0G2JRQ6 117 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 FAM90A2PQ658T7 463 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 Q6ZRM9 215 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 SELENOHQ8IZQ5 122 aaKnown RBP13.52□□□□□ -0.25
TMEM88-201ENST00000301599 OR52E5Q8NH55 327 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 RBPMSQ93062 196 aaKnown RBP13.52□□□□□ -0.25
TMEM88-201ENST00000301599 NAA60Q9H7X0 242 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 STARD9Q9P2P6 4700 aa13.52□□□□□ -0.25
TMEM88-201ENST00000301599 IGHV3OR16-13A0A075B7E8 117 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 IGHV3-74A0A0B4J1X5 117 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 CXCL3P19876 107 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 ANXA7P20073 488 aaKnown RBP13.51□□□□□ -0.25
TMEM88-201ENST00000301599 TFPI2P48307 235 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 TCF24Q7RTU0 167 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 C12orf45Q8N5I9 185 aaPredicted RBP13.51□□□□□ -0.25
TMEM88-201ENST00000301599 SEC22CQ9BRL7 303 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 KCNIP3Q9Y2W7 256 aa13.51□□□□□ -0.25
TMEM88-201ENST00000301599 PUS1Q9Y606 427 aaKnown RBP eCLIP13.51□□□□□ -0.25
TMEM88-201ENST00000301599 RYR2Q92736 4967 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 IGKV3-7A0A075B6H7 116 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 CLN5O75503 358 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 SCGB2A1O75556 95 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 JTBO76095 146 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 OR4E1P0C645 316 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 RPL35AP18077 110 aaKnown RBP13.5□□□□□ -0.25
TMEM88-201ENST00000301599 OPRK1P41145 380 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 HTR2BP41595 481 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 RAB14P61106 215 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 MLANAQ16655 118 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 APRG1Q8IVJ8 170 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 OR4X1Q8NH49 305 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 RNF183Q96D59 192 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 VSIRQ9H7M9 311 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
TMEM88-201ENST00000301599 HEYLQ9NQ87 328 aaPredicted RBP13.5□□□□□ -0.25
TMEM88-201ENST00000301599 NPPCP23582 126 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 DEFB135Q30KP9 77 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 BSXQ3C1V8 233 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 TMEM268Q5VZI3 342 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 TEX261Q6UWH6 196 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 GBGT1Q8N5D6 347 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 LHFPL5Q8TAF8 219 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 ST8SIA2Q92186 375 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 GPR146Q96CH1 333 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
TMEM88-201ENST00000301599 TMEM231Q9H6L2 316 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 CACFD1Q9UGQ2 172 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 TMEM56-RWDD3S4R434 201 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 U3KQ87 197 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 SACSQ9NZJ4 4579 aa13.49□□□□□ -0.25
TMEM88-201ENST00000301599 TRAV30A0A087WSZ9 112 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 A0A1B0GU03 582 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 A0A1W2PS18 150 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 DNASE2O00115 360 aaPredicted RBP13.48□□□□□ -0.25
TMEM88-201ENST00000301599 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
TMEM88-201ENST00000301599 CYCSP99999 105 aaKnown RBP13.48□□□□□ -0.25
TMEM88-201ENST00000301599 TNFRSF9Q07011 255 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 TMEM230Q96A57 120 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 CSTL1Q9H114 145 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 ZFAND3Q9H8U3 227 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 CACNG5Q9UF02 275 aa13.48□□□□□ -0.25
TMEM88-201ENST00000301599 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
TMEM88-201ENST00000301599 CEBPZOSA8MTT3 80 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms