RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 CNIH1O95406 144 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 CKS2P33552 79 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 LINC00310P59036 64 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 HCP5Q6MZN7 132 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 ZNF788Q6ZQV5 615 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 COLCA1Q6ZS62 124 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 SPEM1Q8N4L4 309 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 Q8NFD4 153 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 PCDH15Q96QU1 1955 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 POLEQ07864 2286 aa9.78□□□□□ -0.84
ERCC1-202ENST00000300853 THADAQ6YHU6 1953 aa9.77□□□□□ -0.84
ERCC1-202ENST00000300853 MEOX1P50221 254 aa9.77□□□□□ -0.84
ERCC1-202ENST00000300853 TMEM249Q2WGJ8 235 aa9.77□□□□□ -0.84
ERCC1-202ENST00000300853 C17orf82Q86X59 251 aaPredicted RBP9.77□□□□□ -0.84
ERCC1-202ENST00000300853 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.84
ERCC1-202ENST00000300853 CNOT1A5YKK6 2376 aaKnown RBP9.77□□□□□ -0.85
ERCC1-202ENST00000300853 TNCP24821 2201 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PPIAL4CA0A0B4J2A2 164 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 A0A1W2PRD5 423 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 A0A1W2PRF3 423 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 A0A1W2PRM7 423 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 SMIM27A0A1W2PRY6 76 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PMS2P5A8MQ11 134 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PPIAL4GP0DN37 164 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 SLC25A33Q9BSK2 321 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PRDM6Q9NQX0 595 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PPIAL4EA0A075B759 164 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 PPIAL4FP0DN26 164 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 MLANAQ16655 118 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 LHFPL4Q7Z7J7 247 aa9.77□□□□□ -0.85
ERCC1-202ENST00000300853 IGHV1-24A0A0C4DH33 117 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 RPS20P60866 119 aaKnown RBP9.76□□□□□ -0.85
ERCC1-202ENST00000300853 TIMM23BQ5SRD1 257 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 OR4X2Q8NGF9 303 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 MRPL14Q6P1L8 145 aaKnown RBP9.76□□□□□ -0.85
ERCC1-202ENST00000300853 KIR3DL3Q8N743 410 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 FAM222BQ8WU58 562 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 AAMDCQ9H7C9 122 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 LSM4Q9Y4Z0 139 aaKnown RBP9.76□□□□□ -0.85
ERCC1-202ENST00000300853 SCGB1C2P0DMR2 95 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 PRB4P10163 310 aaPredicted RBP9.76□□□□□ -0.85
ERCC1-202ENST00000300853 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
ERCC1-202ENST00000300853 EPOPA6NHQ4 379 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 H0YJW9 148 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 M0R1B8 84 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 CKS1BP61024 79 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
ERCC1-202ENST00000300853 COQ2Q96H96 371 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 HIST1H4GQ99525 98 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 TTTY12Q9BZ98 90 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 VPS13AQ96RL7 3174 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 IGLV3-19P01714 112 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 FXYD7P58549 80 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 OR10W1Q8NGF6 305 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 TNFRSF14Q92956 283 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
ERCC1-202ENST00000300853 TMEM131Q92545 1883 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 FAM90A9PA6NNJ1 464 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 VDAC2P45880 294 aaPredicted RBP9.74□□□□□ -0.85
ERCC1-202ENST00000300853 CD69Q07108 199 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 PSG3Q16557 428 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 PEAR1Q5VY43 1037 aaPredicted RBP9.74□□□□□ -0.85
ERCC1-202ENST00000300853 SP5Q6BEB4 398 aaPredicted RBP9.74□□□□□ -0.85
ERCC1-202ENST00000300853 TMEM178AQ8NBL3 297 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 SARAFQ96BY9 339 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 HIGD1AQ9Y241 93 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 H3BRM9 83 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 IGLV2-14P01704 120 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 OR9G4Q8NGQ1 327 aa9.74□□□□□ -0.85
ERCC1-202ENST00000300853 PKDREJQ9NTG1 2253 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 LOC102723996A0A087X1L8 192 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 H3BVH4 76 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 K7EP34 96 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 COX8AP10176 69 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 AZU1P20160 251 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 SCGB1D4Q6XE38 83 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 BCL6BQ8N143 479 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-202ENST00000300853 CT55Q8WUE5 264 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 FTH1P19P0C7X4 201 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 IGLC1P0CG04 106 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 SAA2P0DJI9 122 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-202ENST00000300853 ACP1P24666 158 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 TWIST1Q15672 202 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 INO80CQ6PI98 192 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-202ENST00000300853 ADAMTSL5Q6ZMM2 481 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 NDFIP1Q9BT67 221 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 RABAC1Q9UI14 185 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 TSSC4Q9Y5U2 329 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-202ENST00000300853 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 VSTM5A8MXK1 200 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 TEX45Q8NA69 505 aa9.73□□□□□ -0.85
ERCC1-202ENST00000300853 IDI2-AS1Q9NZ38 188 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms