RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 DMRTC2Q8IXT2 367 aaPredicted RBP10.97□□□□□ -0.65
CDH8-201ENST00000299345 GATCO43716 136 aaKnown RBP10.97□□□□□ -0.65
CDH8-201ENST00000299345 HYPMO75409 117 aa10.97□□□□□ -0.65
CDH8-201ENST00000299345 IGLV2-23P01705 113 aa10.97□□□□□ -0.65
CDH8-201ENST00000299345 YPEL3P61236 119 aaPredicted RBP10.97□□□□□ -0.65
CDH8-201ENST00000299345 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
CDH8-201ENST00000299345 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
CDH8-201ENST00000299345 NAV3Q8IVL0 2385 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 TRAV34A0A0B4J273 112 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 INS-IGF2F8WCM5 200 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 PDLIM4P50479 330 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 LGALS4P56470 323 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 SLC25A2Q9BXI2 301 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 CORTO00230 105 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 PPP1R27Q86WC6 154 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 LINC00479Q96M42 142 aa10.96□□□□□ -0.65
CDH8-201ENST00000299345 IGHV1-3A0A0C4DH29 117 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 CNTFRP26992 372 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 DLX6P56179 175 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 TAS2R60P59551 318 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 HES1Q14469 280 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 V9GYV3 84 aa10.96□□□□□ -0.66
CDH8-201ENST00000299345 PEX7O00628 323 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 TNFRSF13BO14836 293 aaPredicted RBP10.95□□□□□ -0.66
CDH8-201ENST00000299345 ZNF672Q499Z4 452 aaPredicted RBP10.95□□□□□ -0.66
CDH8-201ENST00000299345 SIGLEC9Q9Y336 463 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 PGPA6NDG6 321 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 ISLRO14498 428 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 RBP4P02753 201 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 MT-ND6P03923 174 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 ZNF137PP52743 207 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 MMDQ15546 238 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 COX19Q49B96 90 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
CDH8-201ENST00000299345 IGF2RP11717 2491 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 TRBV9A0A0B4J1U6 114 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 LYZP61626 148 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 ARF6P62330 175 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 LHFPL4Q7Z7J7 247 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 FAM167A-AS1Q96KT0 104 aa10.95□□□□□ -0.66
CDH8-201ENST00000299345 LIPFP07098 398 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 KIAA1644Q3SXP7 199 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 C19orf35Q6ZS72 473 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 SGK494Q96LW2 274 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 MRPL36Q9P0J6 103 aaKnown RBP10.94□□□□□ -0.66
CDH8-201ENST00000299345 CDC42EP3Q9UKI2 254 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 CGB1A6NKQ9 187 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 GRNP28799 593 aaKnown RBP10.94□□□□□ -0.66
CDH8-201ENST00000299345 CHRDL1Q9BU40 450 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 HILPDAQ9Y5L2 63 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 SPTBN1Q01082 2364 aaKnown RBP10.94□□□□□ -0.66
CDH8-201ENST00000299345 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 IGLC7A0M8Q6 106 aa10.94□□□□□ -0.66
CDH8-201ENST00000299345 H3BTX0 84 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 CA1P00915 261 aaPredicted RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 CA7P43166 264 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 UCNP55089 124 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 PAFAH1B2P68402 229 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 ST6GALNAC3Q8NDV1 305 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 FAM103A1Q9BTL3 118 aaKnown RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 ZNF253O75346 499 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 LY6HO94772 140 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 HTR1DP28221 377 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 GNG5P63218 68 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 DAZAP1Q96EP5 407 aaKnown RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 SERF1AO75920 110 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 COMPP49747 757 aaPredicted RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 CX3CL1P78423 397 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 NOL4LQ96MY1 436 aaPredicted RBP10.93□□□□□ -0.66
CDH8-201ENST00000299345 RASL11BQ9BPW5 248 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 RAXQ9Y2V3 346 aa10.93□□□□□ -0.66
CDH8-201ENST00000299345 MFAP2P55001 183 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 TOMM20LQ6UXN7 152 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 HSPB9Q9BQS6 159 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 NAGKQ9UJ70 344 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 HIGD1AQ9Y241 93 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 CEACAM3P40198 252 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 REC114Q7Z4M0 266 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 C11orf42Q8N5U0 333 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 TMEM68Q96MH6 324 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 TRGV9Q99603 122 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 GSX1Q9H4S2 264 aaPredicted RBP10.92□□□□□ -0.66
CDH8-201ENST00000299345 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 IGLV1-47P01700 117 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 AMY1AP04745 511 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 KLRB1Q12918 225 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 LEMD1Q68G75 181 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 ZNF329Q86UD4 541 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 ZNF664Q8N3J9 261 aa10.92□□□□□ -0.66
CDH8-201ENST00000299345 BEND2Q8NDZ0 799 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms