RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZNF727A8MUV8 499 aa20.25■□□□□ 0.83
SDCCAG3-201ENST00000298537 A0A096LNT2 108 aa20.25■□□□□ 0.83
SDCCAG3-201ENST00000298537 K7EIM0 57 aa20.25■□□□□ 0.83
SDCCAG3-201ENST00000298537 TMEM116Q8NCL8 245 aa20.25■□□□□ 0.83
SDCCAG3-201ENST00000298537 NIPSNAP3BQ9BS92 247 aa20.25■□□□□ 0.83
SDCCAG3-201ENST00000298537 LINC01548A6NM66 108 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 OR5G3P0C626 314 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 TMEM249Q2WGJ8 235 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 OR4X1Q8NH49 305 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 CSPG4Q6UVK1 2322 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.24■□□□□ 0.831e-6■■■□□ 15
SDCCAG3-201ENST00000298537 SNRPCP09234 159 aaKnown RBP20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 OR10J4P0C629 311 aa20.24■□□□□ 0.83
SDCCAG3-201ENST00000298537 BRS3P32247 399 aa20.23■□□□□ 0.83
SDCCAG3-201ENST00000298537 ETFRF1Q6IPR1 90 aa20.23■□□□□ 0.83
SDCCAG3-201ENST00000298537 OR5T1Q8NG75 326 aa20.23■□□□□ 0.83
SDCCAG3-201ENST00000298537 DERL1Q9BUN8 251 aa20.23■□□□□ 0.83
SDCCAG3-201ENST00000298537 PIFOQ8TCI5 191 aa20.22■□□□□ 0.83
SDCCAG3-201ENST00000298537 FANCD2OSQ96PS1 177 aa20.22■□□□□ 0.83
SDCCAG3-201ENST00000298537 PARLQ9H300 379 aa20.22■□□□□ 0.83
SDCCAG3-201ENST00000298537 TVP23CQ96ET8 276 aa20.22■□□□□ 0.83
SDCCAG3-201ENST00000298537 TAGLN2P37802 199 aaKnown RBP20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 SMIM7Q9BQ49 75 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 SRSF8Q9BRL6 282 aaKnown RBP20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 DNAJC4Q9NNZ3 241 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 CORTO00230 105 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 OR7C2O60412 319 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 ORM2P19652 201 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 FAM167A-AS1Q96KT0 104 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 SLC25A2Q9BXI2 301 aa20.21■□□□□ 0.83
SDCCAG3-201ENST00000298537 COX7A2P2O60397 106 aa20.2■□□□□ 0.82
SDCCAG3-201ENST00000298537 IGLC1P0CG04 106 aa20.2■□□□□ 0.82
SDCCAG3-201ENST00000298537 DSCR9P59020 149 aa20.2■□□□□ 0.82
SDCCAG3-201ENST00000298537 TIGITQ495A1 244 aa20.2■□□□□ 0.82
SDCCAG3-201ENST00000298537 HELZ2Q9BYK8 2649 aaKnown RBP20.2■□□□□ 0.82
SDCCAG3-201ENST00000298537 B4DSR2 109 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 RHEBQ15382 184 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 OR1B1Q8NGR6 318 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 TRGV9Q99603 122 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 SDF2L1Q9HCN8 221 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 SMCO4Q9NRQ5 59 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 COLCA2A8K830 154 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 RNF223E7ERA6 249 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 PYYP10082 97 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 RBM14Q96PK6 669 aaKnown RBP20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 RASL11BQ9BPW5 248 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 ZNF355PQ9NSJ1 428 aa20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 TECRQ9NZ01 308 aaKnown RBP20.19■□□□□ 0.82
SDCCAG3-201ENST00000298537 TMEM250H0YL14 139 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 IGHV3-23P01764 117 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 C10orf113Q5VZT2 155 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 SCO2A0A1W2PP80 73 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 NDUFB4O95168 129 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 SLC25A16P16260 332 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 C22orf15Q8WYQ4 148 aa20.18■□□□□ 0.82
SDCCAG3-201ENST00000298537 IGLV11-55A0A075B6I3 123 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 ATP6V0E1O15342 81 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 IGKV1-17P01599 117 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 HLA-DRB1P01911 266 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 C8orf88P0DMB2 117 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 PLA2G2AP14555 144 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 TTC9CQ8N5M4 171 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 OR5AU1Q8NGC0 362 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 AURKAIP1Q9NWT8 199 aaPredicted RBP20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 C1RLQ9NZP8 487 aa20.17■□□□□ 0.82
SDCCAG3-201ENST00000298537 NPIPB5A8MRT5 1133 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 PSG1P11464 419 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 SELENOTP62341 195 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 ECSCRQ19T08 205 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 LINC00305Q7Z4B0 112 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 PGPEP1LA6NFU8 196 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 LY6EQ16553 131 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 LEMD1Q68G75 181 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 NANPQ8TBE9 248 aa20.16■□□□□ 0.82
SDCCAG3-201ENST00000298537 G3V318 75 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 OR2J3O76001 311 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 NDUFB8O95169 186 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 SSX3Q99909 188 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 MDFIC2A0A1B0GVS7 189 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 AMY1AP04745 511 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 C5orf56Q8N8D9 126 aa20.15■□□□□ 0.82
SDCCAG3-201ENST00000298537 ADIRFQ15847 76 aa20.14■□□□□ 0.82
SDCCAG3-201ENST00000298537 ZNF343Q6P1L6 599 aa20.14■□□□□ 0.82
SDCCAG3-201ENST00000298537 FAM24BQ8N5W8 94 aa20.14■□□□□ 0.82
SDCCAG3-201ENST00000298537 C19orf24Q9BVV8 132 aa20.14■□□□□ 0.82
SDCCAG3-201ENST00000298537 F8W735 103 aaPredicted RBP20.14■□□□□ 0.81
SDCCAG3-201ENST00000298537 DEFB113Q30KQ7 82 aa20.14■□□□□ 0.81
SDCCAG3-201ENST00000298537 TMUB1Q9BVT8 246 aa20.14■□□□□ 0.81
SDCCAG3-201ENST00000298537 CLN5O75503 358 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 RPL23P62829 140 aaKnown RBP20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 MRPL32Q9BYC8 188 aaKnown RBP20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 LINC00527Q9UJ94 153 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 TRBV20OR9-2A0A075B6H5 130 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 TMEM241Q24JQ0 296 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 PQLC2Q6ZP29 291 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 OR1L4Q8NGR5 311 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 PFDN5Q99471 154 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 MEGF9Q9H1U4 602 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 NAT8Q9UHE5 227 aa20.13■□□□□ 0.81
SDCCAG3-201ENST00000298537 PDE6DO43924 150 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 158.6 ms