RNA–Protein interactions for RNA: ENST00000297354.6

SBSPON-201, Transcript of somatomedin B and thrombospondin type 1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SBSPON, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSPON-201ENST00000297354 DEFB125Q8N687 156 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 HARBI1Q96MB7 349 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 CFHR5Q9BXR6 569 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 PROK2Q9HC23 129 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 M0R296 226 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 OR2J3O76001 311 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 ADH4P08319 380 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 PRB3Q04118 309 aaPredicted RBP13.72□□□□□ -0.21
SBSPON-201ENST00000297354 LINC00305Q7Z4B0 112 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 HCFC1P51610 2035 aa13.72□□□□□ -0.21
SBSPON-201ENST00000297354 GOLT1AQ6ZVE7 132 aa13.71□□□□□ -0.21
SBSPON-201ENST00000297354 SPEM1Q8N4L4 309 aa13.71□□□□□ -0.21
SBSPON-201ENST00000297354 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
SBSPON-201ENST00000297354 TIMM23BQ5SRD1 257 aa13.71□□□□□ -0.21
SBSPON-201ENST00000297354 MORN5Q5VZ52 161 aa13.71□□□□□ -0.21
SBSPON-201ENST00000297354 OR4F17Q8NGA8 305 aa13.71□□□□□ -0.21
SBSPON-201ENST00000297354 RNPS1Q15287 305 aaKnown RBP13.71□□□□□ -0.22
SBSPON-201ENST00000297354 SRSF7Q16629 238 aaKnown RBP eCLIP13.71□□□□□ -0.22
SBSPON-201ENST00000297354 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.22
SBSPON-201ENST00000297354 MRPL27Q9P0M9 148 aaKnown RBP13.71□□□□□ -0.22
SBSPON-201ENST00000297354 PPIAL4EA0A075B759 164 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 MMP23AO75900 390 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 PPIAL4FP0DN26 164 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
SBSPON-201ENST00000297354 PRSS47A8MTI9 375 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 RBP4P02753 201 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 CXCL12P48061 93 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 PATE3B3GLJ2 98 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 DNPH1O43598 174 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 PPBPP02775 128 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 CLUHP3Q96NS8 147 aa13.7□□□□□ -0.22
SBSPON-201ENST00000297354 RIF1Q5UIP0 2472 aaKnown RBP13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CYC1P08574 325 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A10P0DMU9 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 GDF5OSQ5U4N7 250 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CHRNA10Q9GZZ6 450 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 KMT2EQ8IZD2 1858 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 AZU1P20160 251 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 IMMP1LQ96LU5 166 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 A0A1B0GV72 72 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 H0YJW9 148 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A6P0DMU7 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A5P0DMU8 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A7P0DMV0 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 BRWD1-AS2P59051 145 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A1Q5HYN5 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 FAM71F2Q6NXP2 309 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 CT45A3Q8NHU0 189 aa13.69□□□□□ -0.22
SBSPON-201ENST00000297354 WDFY3Q8IZQ1 3526 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 TGFAP01135 160 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 ACP1P24666 158 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 SIGMAR1Q99720 223 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 RPP21Q9H633 154 aaKnown RBP13.68□□□□□ -0.22
SBSPON-201ENST00000297354 K7ERJ3 54 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 Q6ZR03 302 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 OR10X1Q8NGY0 326 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 RABAC1Q9UI14 185 aa13.68□□□□□ -0.22
SBSPON-201ENST00000297354 TSSC4Q9Y5U2 329 aaPredicted RBP13.68□□□□□ -0.22
SBSPON-201ENST00000297354 TNRC6AQ8NDV7 1962 aaKnown RBP13.68□□□□□ -0.22
SBSPON-201ENST00000297354 C2orf70A6NJV1 201 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 ACP7Q6ZNF0 438 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 FAM169BQ8N8A8 192 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 CXXC4Q9H2H0 198 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 DOPEY2Q9Y3R5 2298 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 B3GALT5-AS1P59052 145 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 COLCA1Q6ZS62 124 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 FAM222BQ8WU58 562 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 TTTY13Q9BZ97 58 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 PSG3Q16557 428 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 MORN2Q502X0 79 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 SLC25A33Q9BSK2 321 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 MBNL3Q9NUK0 354 aaKnown RBP13.67□□□□□ -0.22
SBSPON-201ENST00000297354 CALYQ9NYX4 217 aa13.67□□□□□ -0.22
SBSPON-201ENST00000297354 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 NBEAP1P0C6P0 100 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 MRPL14Q6P1L8 145 aaKnown RBP13.66□□□□□ -0.22
SBSPON-201ENST00000297354 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 ZNF257Q9Y2Q1 563 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 S4R3C0 116 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 TRBV6-6A0A0A6YYG2 114 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 SAMD5Q5TGI4 173 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 SAA2-SAA4A0A096LPE2 208 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 SMIM27A0A1W2PRY6 76 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 SAA2P0DJI9 122 aaPredicted RBP13.66□□□□□ -0.22
SBSPON-201ENST00000297354 ZNF414Q96IQ9 312 aa13.66□□□□□ -0.22
SBSPON-201ENST00000297354 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 K7EQM0 130 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 SMIM13P0DJ93 91 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 ETDBQ3ZM63 59 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 C17orf82Q86X59 251 aaPredicted RBP13.65□□□□□ -0.22
SBSPON-201ENST00000297354 CCL13Q99616 98 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 CPAMD8Q8IZJ3 1885 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 IGKV1-16P04430 117 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 INO80CQ6PI98 192 aaPredicted RBP13.65□□□□□ -0.22
SBSPON-201ENST00000297354 AMTNQ6UX39 209 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 UBE2ZQ9H832 354 aaPredicted RBP13.65□□□□□ -0.22
SBSPON-201ENST00000297354 PILRBQ9UKJ0 227 aa13.65□□□□□ -0.22
SBSPON-201ENST00000297354 ACACAQ13085 2346 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms