RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 PAX1P15863 534 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 RNFT1Q5M7Z0 435 aa14.57□□□□□ -0.08
PCDHA13-201ENST00000289272 TRAV24A0A0B4J272 114 aa14.56□□□□□ -0.08
PCDHA13-201ENST00000289272 COQ2Q96H96 371 aa14.56□□□□□ -0.08
PCDHA13-201ENST00000289272 LOC105371242A0A075B767 164 aa14.56□□□□□ -0.08
PCDHA13-201ENST00000289272 MOSP00540 346 aa14.56□□□□□ -0.08
PCDHA13-201ENST00000289272 FABP5P3A8MUU1 101 aa14.56□□□□□ -0.08
PCDHA13-201ENST00000289272 FAM231BA6NCW3 169 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 COA6Q5JTJ3 125 aaKnown RBP14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 TMEM170BQ5T4T1 132 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 TMEM42Q69YG0 159 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 TM4SF20Q53R12 229 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 EFNA2O43921 213 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 PSG1P11464 419 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 DUTP33316 252 aaKnown RBP14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 TEX43Q6ZNM6 134 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 EEF1AKMT3Q96AZ1 226 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 SLC50A1Q9BRV3 221 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 GEMIN7Q9H840 131 aaKnown RBP14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 IGLC2P0DOY2 106 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 IGLC3P0DOY3 106 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 ATP5J2P56134 94 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 RALGAPA1Q6GYQ0 2036 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 LINC00312Q9Y6C7 94 aa14.55□□□□□ -0.08
PCDHA13-201ENST00000289272 ZDBF2Q9HCK1 2354 aa14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 CD55P08174 381 aa14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 CDKN1BP46527 198 aa14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 TMEM249Q2WGJ8 235 aa14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 DLX4Q92988 240 aaPredicted RBP14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 NPPCP23582 126 aa14.54□□□□□ -0.08
PCDHA13-201ENST00000289272 SDK2Q58EX2 2172 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 TCF20Q9UGU0 1960 aaKnown RBP14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 C9orf172C9J069 976 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 PLNP26678 52 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 FREM3P0C091 2139 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 APELAP0DMC3 54 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 LOXL3P58215 753 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 MORN2Q502X0 79 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 KLF17Q5JT82 389 aaPredicted RBP14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 ABHD17AQ96GS6 310 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 KLHDC3Q9BQ90 382 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 CT83Q5H943 113 aa14.53□□□□□ -0.08
PCDHA13-201ENST00000289272 SLC25A39Q9BZJ4 359 aaPredicted RBP14.52□□□□□ -0.08
PCDHA13-201ENST00000289272 KIR3DS1Q14943 382 aa14.52□□□□□ -0.08
PCDHA13-201ENST00000289272 CCL19Q99731 98 aa14.52□□□□□ -0.08
PCDHA13-201ENST00000289272 PSG8Q9UQ74 426 aa14.52□□□□□ -0.08
PCDHA13-201ENST00000289272 CRXO43186 299 aaPredicted RBP14.52□□□□□ -0.09
PCDHA13-201ENST00000289272 SPANXCQ9NY87 97 aa14.52□□□□□ -0.09
PCDHA13-201ENST00000289272 J3KRW8 73 aa14.52□□□□□ -0.09
PCDHA13-201ENST00000289272 CECR9P0C854 216 aa14.52□□□□□ -0.09
PCDHA13-201ENST00000289272 BCL6BQ8N143 479 aaPredicted RBP14.52□□□□□ -0.09
PCDHA13-201ENST00000289272 IGKV1-5P01602 117 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 LHX2P50458 406 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 GUSBP1Q15486 140 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 C8orf46Q8TAG6 207 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 FOXI3A8MTJ6 420 aaPredicted RBP14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 CD59P13987 128 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 IGKV1-12A0A0C4DH73 117 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 KIR2DL5BA0A0G2JN68 375 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 KIR2DL5BA0A0G2JPC4 375 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 SMAD7O15105 426 aaKnown RBP14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 IGKV1D-12P01611 117 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 SSBP2P81877 361 aaPredicted RBP14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 KIR2DL5AQ8N109 375 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 FOXL2NBQ6ZUU3 175 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 CHTOPQ9Y3Y2 248 aaKnown RBP14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 SCN8AQ9UQD0 1980 aa14.51□□□□□ -0.09
PCDHA13-201ENST00000289272 GHRHP01286 108 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 RAMP3O60896 148 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 NPSP0C0P6 89 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MAJINQ3KP22 176 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 RNASE6Q93091 150 aaKnown RBP14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MGST2Q99735 147 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 KLK15Q9H2R5 256 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 FHL1Q13642 323 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 FAM159AQ6UWV7 190 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 LEAP2Q969E1 77 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 PNRC2Q9NPJ4 139 aaKnown RBP14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 DEPPQ9NTK1 212 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 ZIC4Q8N9L1 334 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 NUP35Q8NFH5 326 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 DNAJC13O75165 2243 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 SPTA1P02549 2419 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 IGHV2-26A0A0B4J1V2 119 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MUC21A0A0G2JKD1 596 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MUC21A0A140T8X8 626 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 C9orf118A6NHY6 69 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 SAA1P0DJI8 122 aaPredicted RBP14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MEIG1Q5JSS6 88 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 MUC21Q5SSG8 566 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 LYPD1Q8N2G4 141 aa14.5□□□□□ -0.09
PCDHA13-201ENST00000289272 IGHV2OR16-5A0A0B4J2B6 119 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 NDUFA3O95167 84 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 ATP5G2Q06055 141 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 NABP1Q96AH0 204 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 ZNF492Q9P255 531 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 PSG7Q13046 419 aa14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 BEX4Q9NWD9 120 aaPredicted RBP14.49□□□□□ -0.09
PCDHA13-201ENST00000289272 UBE2L6O14933 153 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms