RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 PFDN2Q9UHV9 154 aa10.25□□□□□ -0.77
TPM1-202ENST00000288398 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 A0A0G2JRQ6 117 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 KNCNA6PVL3 124 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 CDS2O95674 445 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 CTF1Q16619 201 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 MLANAQ16655 118 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 PSMG4Q5JS54 123 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 PRRT1Q99946 306 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 C1QTNF4Q9BXJ3 329 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 NAA50Q9GZZ1 169 aaKnown RBP10.24□□□□□ -0.77
TPM1-202ENST00000288398 HRH4Q9H3N8 390 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 MRPL36Q9P0J6 103 aaKnown RBP10.24□□□□□ -0.77
TPM1-202ENST00000288398 KCNIP3Q9Y2W7 256 aa10.24□□□□□ -0.77
TPM1-202ENST00000288398 IFNA10P01566 189 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 IGKV1-17P01599 117 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 IL4P05112 153 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 AKAIN1P0CW23 69 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 NPY1RP25929 384 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 NUP62P37198 522 aaPredicted RBP10.23□□□□□ -0.77
TPM1-202ENST00000288398 YPEL3P61236 119 aaPredicted RBP10.23□□□□□ -0.77
TPM1-202ENST00000288398 IL18Q14116 193 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 BSXQ3C1V8 233 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 C2orf83Q53S99 150 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 FAAP20Q6NZ36 180 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 GPR141Q7Z602 305 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 ACY3Q96HD9 319 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 SCGB3A2Q96PL1 93 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 RABL2AQ9UBK7 228 aaPredicted RBP10.23□□□□□ -0.77
TPM1-202ENST00000288398 TBC1D24Q9ULP9 559 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 RABL2BQ9UNT1 228 aa10.23□□□□□ -0.77
TPM1-202ENST00000288398 TRAV10A0A0B4J240 114 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 NXPH3O95157 252 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 IGLC1P0CG04 106 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 RD3LP0DJH9 198 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 SULT1A3P0DMM9 295 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 SULT1A4P0DMN0 295 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 HLA-DMBP28068 263 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 PRSS54Q6PEW0 395 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 Q6ZRM9 215 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 SELENOHQ8IZQ5 122 aaKnown RBP10.22□□□□□ -0.77
TPM1-202ENST00000288398 Q8NAQ8 132 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 GLYATL2Q8WU03 294 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 GPR146Q96CH1 333 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 SCP2D1Q9UJQ7 156 aa10.22□□□□□ -0.77
TPM1-202ENST00000288398 CRYM-AS1A6NIL9 109 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 AARDQ4LEZ3 155 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 C16orf54Q6UWD8 224 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 SIGLEC15Q6ZMC9 328 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 CLVS1Q8IUQ0 354 aaPredicted RBP10.21□□□□□ -0.77
TPM1-202ENST00000288398 SMIM4Q8WVI0 70 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 NPIPB3Q92617 1050 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 DIRAS2Q96HU8 199 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 RAB40CQ96S21 281 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 RTBDNQ9BSG5 229 aaPredicted RBP10.21□□□□□ -0.77
TPM1-202ENST00000288398 NRN1Q9NPD7 142 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.77
TPM1-202ENST00000288398 PIGBOS1A0A0B4J2F0 54 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 TOMM40O96008 361 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 FABP1P07148 127 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 ANXA3P12429 323 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 C4BPBP20851 252 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 OR4C16Q8NGL9 310 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 LHFPL5Q8TAF8 219 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 GLMPQ8WWB7 406 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 IL22RA2Q969J5 263 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 PBDC1Q9BVG4 233 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 MRPS26Q9BYN8 205 aaKnown RBP10.2□□□□□ -0.78
TPM1-202ENST00000288398 MCUBQ9NWR8 336 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 U3KQ87 197 aa10.2□□□□□ -0.78
TPM1-202ENST00000288398 ZFP92A6NM28 416 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 ZNF705EA8MWA4 302 aaPredicted RBP10.19□□□□□ -0.78
TPM1-202ENST00000288398 FAM90A26D6RGX4 464 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 CTDSP2O14595 271 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 NOL3O60936 208 aaKnown RBP10.19□□□□□ -0.78
TPM1-202ENST00000288398 RBMY1A1P0DJD3 496 aaKnown RBP10.19□□□□□ -0.78
TPM1-202ENST00000288398 RBMY1CP0DJD4 496 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 CCR6P51684 374 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 SRPXP78539 464 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 RBMY1FQ15415 496 aaKnown RBP10.19□□□□□ -0.78
TPM1-202ENST00000288398 Q6ZTC4 211 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 OR51S1Q8NGJ8 323 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 SLC35E1Q96K37 410 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 MIXL1Q9H2W2 232 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 SEPSECSQ9HD40 501 aaKnown RBP10.19□□□□□ -0.78
TPM1-202ENST00000288398 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 GPR132Q9UNW8 380 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 TMEM56-RWDD3S4R434 201 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 U3KQE9 123 aa10.19□□□□□ -0.78
TPM1-202ENST00000288398 IGHV4-4A0A075B6R2 117 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 CTDSPLO15194 276 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 GIG44P09565 113 aaPredicted RBP10.18□□□□□ -0.78
TPM1-202ENST00000288398 SMIM18P0DKX4 95 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 AKR1C4P17516 323 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 ID1P41134 155 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 KLF9Q13886 244 aaPredicted RBP10.18□□□□□ -0.78
TPM1-202ENST00000288398 SMCO1Q147U7 214 aa10.18□□□□□ -0.78
TPM1-202ENST00000288398 USF2Q15853 346 aaPredicted RBP10.18□□□□□ -0.78
TPM1-202ENST00000288398 LGI3Q8N145 548 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms