RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OR10J1P30954 320 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 RAB11AP62491 216 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 ASAH1Q13510 395 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 OR1S2Q8NGQ3 325 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 MITD1Q8WV92 249 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 NPIPB3Q92617 1050 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 ZFAND3Q9H8U3 227 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 C19orf73Q9NVV2 129 aa18.88■□□□□ 0.61
PDF-201ENST00000288022 IGHV3OR16-13A0A075B7E8 117 aa18.87■□□□□ 0.61
PDF-201ENST00000288022 IGHV3-74A0A0B4J1X5 117 aa18.87■□□□□ 0.61
PDF-201ENST00000288022 A8MZ25 164 aa18.87■□□□□ 0.61
PDF-201ENST00000288022 CHEK1O14757 476 aa18.87■□□□□ 0.61
PDF-201ENST00000288022 IGKV1-17P01599 117 aa18.87■□□□□ 0.61
PDF-201ENST00000288022 RPP30P78346 268 aaKnown RBP18.87■□□□□ 0.61
PDF-201ENST00000288022 OR11H12B2RN74 326 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 IGLC1P0CG04 106 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 BMI1P35226 326 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 RNF2Q99496 336 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 SPAG8Q99932 426 aaPredicted RBP18.86■□□□□ 0.61
PDF-201ENST00000288022 SEC22CQ9BRL7 303 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 WFDC10AQ9H1F0 79 aa18.86■□□□□ 0.61
PDF-201ENST00000288022 TSPAN4O14817 238 aa18.85■□□□□ 0.61
PDF-201ENST00000288022 IAH1Q2TAA2 248 aaPredicted RBP18.85■□□□□ 0.61
PDF-201ENST00000288022 DEFB125Q8N687 156 aa18.85■□□□□ 0.61
PDF-201ENST00000288022 ENKURQ8TC29 256 aa18.85■□□□□ 0.61
PDF-201ENST00000288022 SLC35E1Q96K37 410 aa18.85■□□□□ 0.61
PDF-201ENST00000288022 NKX2-1P43699 371 aaPredicted RBP18.84■□□□□ 0.61
PDF-201ENST00000288022 POLR2GP62487 172 aaKnown RBP eCLIP18.84■□□□□ 0.61
PDF-201ENST00000288022 OR4D5Q8NGN0 318 aa18.84■□□□□ 0.61
PDF-201ENST00000288022 ZNF431Q8TF32 576 aaPredicted RBP18.84■□□□□ 0.61
PDF-201ENST00000288022 Q8WTZ3 238 aa18.84■□□□□ 0.61
PDF-201ENST00000288022 U3KQK5 164 aa18.84■□□□□ 0.61
PDF-201ENST00000288022 SCGB1D2O95969 90 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 NPPCP23582 126 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 GPX4P36969 197 aaPredicted RBP18.83■□□□□ 0.6
PDF-201ENST00000288022 YPEL3P61236 119 aaPredicted RBP18.83■□□□□ 0.6
PDF-201ENST00000288022 ID3Q02535 119 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 SPANXN5Q5MJ07 72 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 METTL26Q96S19 204 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 SRD5A3Q9H8P0 318 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 GSKIPQ9P0R6 139 aa18.83■□□□□ 0.6
PDF-201ENST00000288022 IGKV3-7A0A075B6H7 116 aa18.82■□□□□ 0.6
PDF-201ENST00000288022 IGHV3-66A0A0C4DH42 116 aa18.82■□□□□ 0.6
PDF-201ENST00000288022 H3BP45 60 aa18.82■□□□□ 0.6
PDF-201ENST00000288022 APOHP02749 345 aaPredicted RBP18.82■□□□□ 0.6
PDF-201ENST00000288022 ST8SIA2Q92186 375 aa18.82■□□□□ 0.6
PDF-201ENST00000288022 OR4C46A6NHA9 309 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 CCSO14618 274 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 SSSCA1O60232 199 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 IFITM3Q01628 133 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 GAMTQ14353 236 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 ZBTB8BQ8NAP8 495 aaPredicted RBP18.81■□□□□ 0.6
PDF-201ENST00000288022 NARS2Q96I59 477 aaKnown RBP18.81■□□□□ 0.6
PDF-201ENST00000288022 TMEM231Q9H6L2 316 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 ZMAT4Q9H898 229 aa18.81■□□□□ 0.6
PDF-201ENST00000288022 STRAPQ9Y3F4 350 aaKnown RBP18.81■□□□□ 0.6
PDF-201ENST00000288022 ZFP92A6NM28 416 aa18.8■□□□□ 0.6
PDF-201ENST00000288022 FAM25EA8MYX2 175 aa18.8■□□□□ 0.6
PDF-201ENST00000288022 TCF24Q7RTU0 167 aa18.8■□□□□ 0.6
PDF-201ENST00000288022 C12orf45Q8N5I9 185 aaPredicted RBP18.8■□□□□ 0.6
PDF-201ENST00000288022 VSIRQ9H7M9 311 aa18.8■□□□□ 0.6
PDF-201ENST00000288022 PSENENQ9NZ42 101 aa18.8■□□□□ 0.6
PDF-201ENST00000288022 A0A1W2PS18 150 aa18.79■□□□□ 0.6
PDF-201ENST00000288022 RD3LP0DJH9 198 aa18.79■□□□□ 0.6
PDF-201ENST00000288022 TFPI2P48307 235 aa18.79■□□□□ 0.6
PDF-201ENST00000288022 UBQLN2Q9UHD9 624 aa18.79■□□□□ 0.6
PDF-201ENST00000288022 COL7A1Q02388 2944 aa18.79■□□□□ 0.6
PDF-201ENST00000288022 TOMM40O96008 361 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 IL4P05112 153 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 CD5P06127 495 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 RPL11P62913 178 aaKnown RBP18.78■□□□□ 0.6
PDF-201ENST00000288022 HAGHQ16775 308 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 GBGT1Q8N5D6 347 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 DNAH9Q9NYC9 4486 aa18.78■□□□□ 0.6
PDF-201ENST00000288022 C5orf51A6NDU8 294 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 DFFBO76075 338 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 CRYBB3P26998 211 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 DEFA1P59665 94 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 DEFA3P59666 94 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 PAFAH1B2P68402 229 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 LILRB2Q8N423 598 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 RCHY1Q96PM5 261 aa18.77■□□□□ 0.6
PDF-201ENST00000288022 PSG1P11464 419 aa18.76■□□□□ 0.59
PDF-201ENST00000288022 FAM90A2PQ658T7 463 aa18.76■□□□□ 0.59
PDF-201ENST00000288022 GRAMD2BQ96HH9 432 aa18.76■□□□□ 0.59
PDF-201ENST00000288022 SMIM8Q96KF7 97 aa18.76■□□□□ 0.59
PDF-201ENST00000288022 TM2D3Q9BRN9 247 aa18.76■□□□□ 0.59
PDF-201ENST00000288022 RBMY1BA6NDE4 496 aaKnown RBP18.75■□□□□ 0.59
PDF-201ENST00000288022 RBMY1EA6NEQ0 496 aaKnown RBP18.75■□□□□ 0.59
PDF-201ENST00000288022 IL5P05113 134 aa18.75■□□□□ 0.59
PDF-201ENST00000288022 FABP1P07148 127 aa18.75■□□□□ 0.59
PDF-201ENST00000288022 HNRNPCP07910 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
PDF-201ENST00000288022 RBMY1DP0C7P1 496 aaKnown RBP18.75■□□□□ 0.59
PDF-201ENST00000288022 NRARPQ7Z6K4 114 aa18.75■□□□□ 0.59
PDF-201ENST00000288022 OR51G1Q8NGK1 321 aa18.75■□□□□ 0.59
PDF-201ENST00000288022 GPN1Q9HCN4 374 aaPredicted RBP18.75■□□□□ 0.59
PDF-201ENST00000288022 PRSS46E5RG02 174 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 DNASE2O00115 360 aaPredicted RBP18.74■□□□□ 0.59
PDF-201ENST00000288022 P2RY1P47900 373 aa18.74■□□□□ 0.59
PDF-201ENST00000288022 ZNF90Q03938 601 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms