RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 KLF17Q5JT82 389 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-201ENST00000282516 NYNRINQ9P2P1 1898 aaKnown RBP7.34□□□□□ -1.23
NIPBL-201ENST00000282516 GNG5P63218 68 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 PRRC2AP48634 2157 aaKnown RBP7.34□□□□□ -1.23
NIPBL-201ENST00000282516 SBF2Q86WG5 1849 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 A0A1W2PPV9 198 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 PRTN3P24158 256 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 CCL20P78556 96 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 CFHR5Q9BXR6 569 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 MSGN1A6NI15 193 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 FOXS1O43638 330 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 EVI2AP22794 236 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 IGHV3-64A0A075B6Q5 118 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 CD5LO43866 347 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 RHOGP84095 191 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 BSPH1Q075Z2 132 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 MESP2Q0VG99 397 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 MIR17HGQ75NE6 70 aa7.34□□□□□ -1.23
NIPBL-201ENST00000282516 MYMXA0A1B0GTQ4 84 aa7.34□□□□□ -1.24
NIPBL-201ENST00000282516 SIGLEC15Q6ZMC9 328 aa7.34□□□□□ -1.24
NIPBL-201ENST00000282516 PLSCR4Q9NRQ2 329 aa7.34□□□□□ -1.24
NIPBL-201ENST00000282516 UPK2O00526 184 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 RNASE7Q9H1E1 156 aaKnown RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 FAM90A9PA6NNJ1 464 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 A8MXK9 166 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 GLRXP35754 106 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 CD300EQ496F6 205 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 SNHG12Q9BXW3 62 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 C8orf82Q6P1X6 216 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 GLMPQ8WWB7 406 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 ZNF501Q96CX3 271 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 RPP25Q9BUL9 199 aaKnown RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 SRXN1Q9BYN0 137 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 RAMP1O60894 148 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 PCOLCEQ15113 449 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 COLCA1Q6ZS62 124 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 ZNRF1Q8ND25 227 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 TSKUQ8WUA8 353 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 SHANK3Q9BYB0 1731 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 ADAMTSL1Q8N6G6 1762 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 CEACAM8P31997 349 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 ADMP35318 185 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 CCDC168Q8NDH2 2452 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 TGIF1Q15583 401 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 TRAV14DV4A0A0A6YYC5 116 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 PRR19A6NJB7 356 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 CELA2AP08217 269 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 SELLP14151 372 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 PEBP1P30086 187 aaKnown RBP7.33□□□□□ -1.24
NIPBL-201ENST00000282516 NRN1LQ496H8 165 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 PRSS22Q9GZN4 317 aa7.33□□□□□ -1.24
NIPBL-201ENST00000282516 IGHV3-11P01762 117 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 UCP1P25874 307 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 RASL11AQ6T310 242 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 SAA2-SAA4A0A096LPE2 208 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 C12orf77C9JDV5 145 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 SAA2P0DJI9 122 aaPredicted RBP7.32□□□□□ -1.24
NIPBL-201ENST00000282516 IGFBP6P24592 240 aaPredicted RBP7.32□□□□□ -1.24
NIPBL-201ENST00000282516 DUTP33316 252 aaKnown RBP7.32□□□□□ -1.24
NIPBL-201ENST00000282516 C7orf69Q9H7B7 122 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 SCN10AQ9Y5Y9 1956 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 TMEM14DPA8MWL7 114 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 TFF2Q03403 129 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 LCTP09848 1927 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 ADAMTSL3P82987 1691 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 A0A0U1RRA0 63 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 A0A1W2PRE2 83 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 R3HDMLQ9H3Y0 253 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 IGHV3OR16-8A0A075B7F1 116 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 C15orf61A6NNL5 157 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 C17orf98A8MV24 154 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 CD200R1LQ6Q8B3 271 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 FBLIM1Q8WUP2 373 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 LOC102723996A0A087X1L8 192 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 ATP5G3P48201 142 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 SP9P0CG40 484 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 COX6A1P12074 109 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 NPC2P61916 151 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 CITED1Q99966 193 aa7.32□□□□□ -1.24
NIPBL-201ENST00000282516 BRCA1P38398 1863 aaKnown RBP7.32□□□□□ -1.24
NIPBL-201ENST00000282516 ZP1P60852 638 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 SMRP1Q8NCR6 262 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 TM2D1Q9BX74 207 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BKO60814 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BJP06899 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 GZMBP10144 247 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BOP23527 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BBP33778 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BDP58876 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BCP62807 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 IFITM2Q01629 132 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST2H2BEQ16778 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.31□□□□□ -1.24
NIPBL-201ENST00000282516 LIMS2Q7Z4I7 341 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BHQ93079 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BNQ99877 126 aa7.31□□□□□ -1.24
NIPBL-201ENST00000282516 HIST1H2BMQ99879 126 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms