RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 TMEM140Q9NV12 185 aa8.4□□□□□ -1.07
UPF3B-201ENST00000276201 FOXH1O75593 365 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 PLAUP00749 431 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 PPBPP02775 128 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 GABRA2P47869 451 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 MZT1Q08AG7 82 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 COTL1Q14019 142 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 Q6ZR03 302 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 OR4F17Q8NGA8 305 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 SMIM12Q96EX1 92 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 ADTRPQ96IZ2 230 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CLEC7AQ9BXN2 247 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 SAP30LQ9HAJ7 183 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 NGBQ9NPG2 151 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF331Q9NQX6 463 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF257Q9Y2Q1 563 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CADP27708 2225 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 MYO9AB2RTY4 2548 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CREBBPQ92793 2442 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CRXO43186 299 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-201ENST00000276201 PMCHP20382 165 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 TNFSF4P23510 183 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CRYBB3P26998 211 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 CEBPDP49716 269 aaPredicted RBP8.39□□□□□ -1.07
UPF3B-201ENST00000276201 GNG10P50151 68 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 BSPH1Q075Z2 132 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 LRRC10Q5BKY1 277 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
UPF3B-201ENST00000276201 WDR82Q6UXN9 313 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 MIR17HGQ75NE6 70 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 SSX8Q7RTT4 187 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 ABHD12Q8N2K0 398 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 RNASE8Q8TDE3 154 aaKnown RBP8.39□□□□□ -1.07
UPF3B-201ENST00000276201 SSMEM1Q8WWF3 244 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF503Q96F45 646 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 GRAMD2BQ96HH9 432 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 OR2V2Q96R30 315 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 S1PR3Q99500 378 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 RAB9BQ9NP90 201 aa8.39□□□□□ -1.07
UPF3B-201ENST00000276201 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
UPF3B-201ENST00000276201 J3QR06 171 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 GRPP07492 148 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 USF1P22415 310 aaPredicted RBP8.38□□□□□ -1.07
UPF3B-201ENST00000276201 SSTR5P35346 364 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
UPF3B-201ENST00000276201 NABP2Q9BQ15 211 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 ST20Q9HBF5 79 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
UPF3B-201ENST00000276201 LOC105371242A0A075B767 164 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 FAM181BA6NEQ2 426 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 M0R1X1 148 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 HOXC12P31275 282 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 CFHR2P36980 270 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 PSG5Q15238 335 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 PPP1R35Q8TAP8 253 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 IFI27L2Q9H2X8 130 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 UBTD1Q9HAC8 227 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 ENY2Q9NPA8 101 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 C2orf70A6NJV1 201 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 WNT9BO14905 357 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 CD3EP07766 207 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 LOXL3P58215 753 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 UBE2G1P62253 170 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 ALKBH6Q3KRA9 238 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 TMEM30BQ3MIR4 351 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 FBLN7Q53RD9 439 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 C2orf83Q53S99 150 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
UPF3B-201ENST00000276201 RNASE7Q9H1E1 156 aaKnown RBP8.37□□□□□ -1.07
UPF3B-201ENST00000276201 OBP2BQ9NPH6 170 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 PRNDQ9UKY0 176 aa8.37□□□□□ -1.07
UPF3B-201ENST00000276201 SOX21Q9Y651 276 aaPredicted RBP8.37□□□□□ -1.07
UPF3B-201ENST00000276201 GGTLC3B5MD39 225 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 INS-IGF2F8WCM5 200 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 M0R1B8 84 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 MGST3O14880 152 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 HLA-DRB1P01911 266 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 C8orf88P0DMB2 117 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 CGB3P0DN86 165 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 CGB7P0DN87 165 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 CD40P25942 277 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 C21orf62-AS1Q17RA5 79 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 TMEM108Q6UXF1 575 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 KLF14Q8TD94 323 aaPredicted RBP8.36□□□□□ -1.07
UPF3B-201ENST00000276201 IGHV3-43A0A0B4J1X8 118 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 TRAV3A0A0B4J244 114 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 SHISA9B4DS77 424 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 IGHV3-43DP0DP04 118 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 KIAA1644Q3SXP7 199 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 LYG1Q8N1E2 194 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 GCSAMQ8N6F7 178 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 OR1L8Q8NGR8 309 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF714Q96N38 554 aa8.36□□□□□ -1.07
UPF3B-201ENST00000276201 IGHV1-18A0A0C4DH31 117 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PSMB11A5LHX3 300 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 LINC00205P59089 165 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PRCDQ00LT1 54 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 SLAQ13239 276 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF672Q499Z4 452 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 256.7 ms