RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNF474Q6S9Z5 364 aaPredicted RBP22.23■■□□□ 1.15
CBX4-201ENST00000269397 WIPF2Q8TF74 440 aaPredicted RBP22.23■■□□□ 1.15
CBX4-201ENST00000269397 CBY1Q9Y3M2 126 aa22.23■■□□□ 1.15
CBX4-201ENST00000269397 C20orf202A1L168 122 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 DIAPH2-AS1Q14236 149 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 TCF24Q7RTU0 167 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 DYSFO75923 2080 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 DMXL2Q8TDJ6 3036 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 IGHV1-46P01743 117 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 IGLL1P15814 213 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 CCL3L1P16619 93 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 ZNF714Q96N38 554 aa22.22■■□□□ 1.15
CBX4-201ENST00000269397 ST6GALNAC6Q969X2 333 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 NCOR1P1Q9H4R4 102 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 PTTG1IPP53801 180 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 FOXA3P55318 350 aaPredicted RBP22.21■■□□□ 1.15
CBX4-201ENST00000269397 C22orf34Q6ZV56 151 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 CACNG8Q8WXS5 425 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 FXYD5Q96DB9 178 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 SAP30LQ9HAJ7 183 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 MGAQ8IWI9 3026 aa22.21■■□□□ 1.15
CBX4-201ENST00000269397 RUSC1-AS1Q66K80 236 aa22.2■■□□□ 1.14
CBX4-201ENST00000269397 ZNF788Q6ZQV5 615 aa22.2■■□□□ 1.14
CBX4-201ENST00000269397 FAM231DQ6ZW35 169 aa22.2■■□□□ 1.14
CBX4-201ENST00000269397 H3BTX0 84 aa22.2■■□□□ 1.14
CBX4-201ENST00000269397 LINC00305Q7Z4B0 112 aa22.2■■□□□ 1.14
CBX4-201ENST00000269397 ORM2P19652 201 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 UBE2G1P62253 170 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 ZCCHC24Q8N2G6 241 aaKnown RBP22.19■■□□□ 1.14
CBX4-201ENST00000269397 IGKV1D-37A0A075B6S9 117 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 TRAV9-2A0A087WT02 112 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 TRAV17A0A0B4J275 112 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 C2orf70A6NJV1 201 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 CGB1A6NKQ9 187 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 MOSP00540 346 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 SP9P0CG40 484 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 CCL8P80075 99 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 OR8B3Q8NGG8 313 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 OR8B2Q96RD0 313 aa22.19■■□□□ 1.14
CBX4-201ENST00000269397 H0YJW9 148 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 APOA2P02652 100 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 RBMXL3Q8N7X1 1067 aaKnown RBP22.18■■□□□ 1.14
CBX4-201ENST00000269397 URB1-AS1Q96HZ7 61 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 ZNF430Q9H8G1 570 aaPredicted RBP22.18■■□□□ 1.14
CBX4-201ENST00000269397 KALRNO60229 2985 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 IGLV3-9A0A075B6K5 115 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 SLC25A5P05141 298 aaKnown RBP22.18■■□□□ 1.14
CBX4-201ENST00000269397 LINC00322Q6ZN03 302 aaPredicted RBP22.18■■□□□ 1.14
CBX4-201ENST00000269397 DEFB123Q8N688 67 aa22.18■■□□□ 1.14
CBX4-201ENST00000269397 GATA4P43694 442 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 RASL11AQ6T310 242 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 ZNF833PQ6ZTB9 187 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 OSR1Q8TAX0 266 aaPredicted RBP22.17■■□□□ 1.14
CBX4-201ENST00000269397 FLYWCH2Q96CP2 140 aaKnown RBP22.17■■□□□ 1.14
CBX4-201ENST00000269397 APELAP0DMC3 54 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 PCP4P48539 62 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 ATP5IP56385 69 aaPredicted RBP22.17■■□□□ 1.14
CBX4-201ENST00000269397 C7orf69Q9H7B7 122 aa22.17■■□□□ 1.14
CBX4-201ENST00000269397 TCRBV4S1A1TA0A5B7 111 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 FSTL3O95633 263 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 FAM169BQ8N8A8 192 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 PGPA6NDG6 321 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 HIST1H1EP10412 219 aaKnown RBP22.16■■□□□ 1.14
CBX4-201ENST00000269397 KLF5Q13887 457 aaPredicted RBP22.16■■□□□ 1.14
CBX4-201ENST00000269397 TIMM23BQ5SRD1 257 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 OR1L4Q8NGR5 311 aa22.16■■□□□ 1.14
CBX4-201ENST00000269397 IGHV2-26A0A0B4J1V2 119 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 hADV38S2A0JD32 116 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 PLA2G2CQ5R387 149 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 LINC00173Q6ZV60 143 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 ERASQ7Z444 233 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 OR1B1Q8NGR6 318 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 LINC00574Q9H8X3 128 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 MRPS16Q9Y3D3 137 aaKnown RBP22.15■■□□□ 1.14
CBX4-201ENST00000269397 EP300Q09472 2414 aaPredicted RBP22.15■■□□□ 1.14
CBX4-201ENST00000269397 PKDREJQ9NTG1 2253 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 ADGRG4Q8IZF6 3080 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 IGHV3-21A0A0B4J1V1 117 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 BPIFB3P59826 476 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 TPSG1Q9NRR2 321 aa22.15■■□□□ 1.14
CBX4-201ENST00000269397 CNOT1A5YKK6 2376 aaKnown RBP22.15■■□□□ 1.14
CBX4-201ENST00000269397 PDPNQ86YL7 162 aa22.14■■□□□ 1.14
CBX4-201ENST00000269397 ORAOV1Q8WV07 137 aa22.14■■□□□ 1.14
CBX4-201ENST00000269397 TM4SF5O14894 197 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 OR4F17Q8NGA8 305 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 RNASE8Q8TDE3 154 aaKnown RBP22.14■■□□□ 1.13
CBX4-201ENST00000269397 EPDR1Q9UM22 224 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 LEMD1Q68G75 181 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 HCP5Q6MZN7 132 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 SSX8Q7RTT4 187 aa22.14■■□□□ 1.13
CBX4-201ENST00000269397 OR2J3O76001 311 aa22.13■■□□□ 1.13
CBX4-201ENST00000269397 ZNF137PP52743 207 aa22.13■■□□□ 1.13
CBX4-201ENST00000269397 PGLYRP4Q96LB8 373 aa22.13■■□□□ 1.13
CBX4-201ENST00000269397 RITA1Q96K30 269 aa22.13■■□□□ 1.13
CBX4-201ENST00000269397 COX11Q9Y6N1 276 aa22.13■■□□□ 1.13
CBX4-201ENST00000269397 DMXL1Q9Y485 3027 aa22.12■■□□□ 1.13
CBX4-201ENST00000269397 OR5AN1Q8NGI8 311 aa22.12■■□□□ 1.13
CBX4-201ENST00000269397 LINC00312Q9Y6C7 94 aa22.12■■□□□ 1.13
CBX4-201ENST00000269397 A0A1B0GXF2 115 aa22.12■■□□□ 1.13
CBX4-201ENST00000269397 ZNF596Q8TC21 504 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms