RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 HIST1H2BCP62807 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST2H2BEQ16778 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 KLF17Q5JT82 389 aaPredicted RBP18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.36■□□□□ 0.53
RAB40B-201ENST00000269347 FAM120AOSQ5T036 256 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 NRGNQ92686 78 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BHQ93079 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BNQ99877 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 HIST1H2BMQ99879 126 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 RNF5Q99942 180 aa18.36■□□□□ 0.53
RAB40B-201ENST00000269347 PDE6DO43924 150 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 PYYP10082 97 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 LINC01551Q86U37 167 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 OR7C2O60412 319 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 CLEC12BQ2HXU8 276 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 ASPHD1Q5U4P2 390 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 WNT10AQ9GZT5 417 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 CENPEQ02224 2701 aa18.35■□□□□ 0.53
RAB40B-201ENST00000269347 TOX4O94842 621 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 HNF1AP20823 631 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 CEACAM3P40198 252 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 Q8N6K4 173 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 OR4X1Q8NH49 305 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 DNAJC4Q9NNZ3 241 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 GGTLC3B5MD39 225 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 H7BYZ3 331 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 I3L2K1 104 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 TNFRSF19Q9NS68 423 aa18.34■□□□□ 0.53
RAB40B-201ENST00000269347 TECRQ9NZ01 308 aaKnown RBP18.34■□□□□ 0.53
RAB40B-201ENST00000269347 UBR5O95071 2799 aaPredicted RBP18.33■□□□□ 0.53
RAB40B-201ENST00000269347 FAM208BQ5VWN6 2430 aa18.33■□□□□ 0.53
RAB40B-201ENST00000269347 LRRK2Q5S007 2527 aa18.33■□□□□ 0.53
RAB40B-201ENST00000269347 CNIH1O95406 144 aa18.33■□□□□ 0.52
RAB40B-201ENST00000269347 CDX1P47902 265 aaPredicted RBP18.33■□□□□ 0.52
RAB40B-201ENST00000269347 S100A12P80511 92 aa18.33■□□□□ 0.52
RAB40B-201ENST00000269347 TMEM116Q8NCL8 245 aa18.33■□□□□ 0.52
RAB40B-201ENST00000269347 ZNF355PQ9NSJ1 428 aa18.33■□□□□ 0.52
RAB40B-201ENST00000269347 C8orf88P0DMB2 117 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 FXYD3Q14802 87 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 C5orf64Q2M2E5 130 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 PIP4P2Q8N4L2 257 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 OR5B12Q96R08 314 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 S4R3C0 116 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 IGHV4-61A0A0C4DH41 118 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 PFN1P07737 140 aaKnown RBP18.32■□□□□ 0.52
RAB40B-201ENST00000269347 S100PP25815 95 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 FRZBQ92765 325 aa18.32■□□□□ 0.52
RAB40B-201ENST00000269347 F6UZH7 168 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 TRGC1P0CF51 173 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 GALR1P47211 349 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 SRSF1Q07955 248 aaKnown RBP eCLIP18.31■□□□□ 0.52
RAB40B-201ENST00000269347 OR5AU1Q8NGC0 362 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 POLQO75417 2590 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 OCC1Q8TAD7 63 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 ANAPC16Q96DE5 110 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 NIT2Q9NQR4 276 aa18.31■□□□□ 0.52
RAB40B-201ENST00000269347 K7EIM0 57 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 K7EN84 100 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 COX7A2P2O60397 106 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 ORM2P19652 201 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 CRYBB3P26998 211 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 CX3CL1P78423 397 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 C10orf113Q5VZT2 155 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 OR2T10Q8NGZ9 312 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 CCL19Q99731 98 aa18.3■□□□□ 0.52
RAB40B-201ENST00000269347 IGHV3OR16-10A0A075B7F0 116 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 SAA4P35542 130 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 PQLC2Q6ZP29 291 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 LINC00305Q7Z4B0 112 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 C11orf52Q96A22 123 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 TXNDC17Q9BRA2 123 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 NBPF19A0A087WUL8 3843 aa18.29■□□□□ 0.52
RAB40B-201ENST00000269347 NCBP2LA6PVI3 153 aaKnown RBP18.28■□□□□ 0.52
RAB40B-201ENST00000269347 IGLC1P0CG04 106 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 EBI3Q14213 229 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 LEMD1Q68G75 181 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 TRGV9Q99603 122 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 PYGO2Q9BRQ0 406 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 C19orf24Q9BVV8 132 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 SRD5A3Q9H8P0 318 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 IFITM10A6NMD0 228 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 MINOS1Q5TGZ0 78 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 OR1B1Q8NGR6 318 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 MINOS1-NBL1R4GNA1 71 aa18.28■□□□□ 0.52
RAB40B-201ENST00000269347 PHOX2AO14813 284 aa18.27■□□□□ 0.52
RAB40B-201ENST00000269347 EGR2P11161 476 aaPredicted RBP18.27■□□□□ 0.52
RAB40B-201ENST00000269347 S100A2P29034 98 aa18.27■□□□□ 0.52
RAB40B-201ENST00000269347 UBE2E1P51965 193 aa18.27■□□□□ 0.52
RAB40B-201ENST00000269347 SUMO1P63165 101 aaKnown RBP18.27■□□□□ 0.52
RAB40B-201ENST00000269347 TIGITQ495A1 244 aa18.27■□□□□ 0.52
RAB40B-201ENST00000269347 MRPL32Q9BYC8 188 aaKnown RBP18.27■□□□□ 0.52
RAB40B-201ENST00000269347 TMEM167BQ9NRX6 74 aa18.27■□□□□ 0.52
RAB40B-201ENST00000269347 PPP1R2P9O14990 202 aa18.27■□□□□ 0.51
RAB40B-201ENST00000269347 PDLIM4P50479 330 aa18.27■□□□□ 0.51
RAB40B-201ENST00000269347 ETFRF1Q6IPR1 90 aa18.27■□□□□ 0.51
RAB40B-201ENST00000269347 FXYD5Q96DB9 178 aa18.27■□□□□ 0.51
RAB40B-201ENST00000269347 FANCD2OSQ96PS1 177 aa18.27■□□□□ 0.51
RAB40B-201ENST00000269347 GAR1Q9NY12 217 aaKnown RBP18.27■□□□□ 0.51
RAB40B-201ENST00000269347 IGHV4-30-2A0A087WSY4 118 aa18.26■□□□□ 0.51
RAB40B-201ENST00000269347 ELOA3CA0A087WX78 387 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms