RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CNTFRP26992 372 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 GLRXP35754 106 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 TCTAP57738 103 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 ZNF841Q6ZN19 808 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 NIT1Q86X76 327 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 FAM167A-AS1Q96KT0 104 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 COL6A6A6NMZ7 2263 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 CD69Q07108 199 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 C11orf42Q8N5U0 333 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 RBMXL3Q8N7X1 1067 aaKnown RBP13.59□□□□□ -0.23
SQLE-201ENST00000265896 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 CLEC7AQ9BXN2 247 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 GNB1LQ9BYB4 327 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 DNAJC4Q9NNZ3 241 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 SLC25A10Q9UBX3 287 aaPredicted RBP13.59□□□□□ -0.23
SQLE-201ENST00000265896 SELENOKQ9Y6D0 94 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
SQLE-201ENST00000265896 NUDT10Q8NFP7 164 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 NUDT11Q96G61 164 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 SLC35E1Q96K37 410 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 KCNS1Q96KK3 526 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 RPUSD1Q9UJJ7 312 aaKnown RBP13.59□□□□□ -0.23
SQLE-201ENST00000265896 S4R3C0 116 aa13.59□□□□□ -0.23
SQLE-201ENST00000265896 DPRXA6NFQ7 191 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 FAM90A9PA6NNJ1 464 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 HIGD1CA8MV81 97 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 DLEU1O43261 78 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 ZNF324O75467 553 aaPredicted RBP13.58□□□□□ -0.24
SQLE-201ENST00000265896 KIR2DS2P43631 304 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 LINC00322Q6ZN03 302 aaPredicted RBP13.58□□□□□ -0.24
SQLE-201ENST00000265896 LINC00305Q7Z4B0 112 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 NUP35Q8NFH5 326 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 PMCHL2Q9BQD1 86 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 TXNDC17Q9BRA2 123 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 PPOXP50336 477 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 C10orf113Q5VZT2 155 aa13.58□□□□□ -0.24
SQLE-201ENST00000265896 IGF2RP11717 2491 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 LYNX1G3V0Z9 82 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 HSBP1O75506 76 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 AMY1AP04745 511 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 LYNX1P0DP58 116 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 TAS2R45P59539 299 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 LINC00173Q6ZV60 143 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 SPACA3Q8IXA5 215 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 IGF2BP2-AS1Q96M15 143 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 ZNF430Q9H8G1 570 aaPredicted RBP13.57□□□□□ -0.24
SQLE-201ENST00000265896 HYPMO75409 117 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 SELENOVP59797 346 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 MZT1Q08AG7 82 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 SLC25A48Q6ZT89 311 aaKnown RBP13.57□□□□□ -0.24
SQLE-201ENST00000265896 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
SQLE-201ENST00000265896 FLYWCH2Q96CP2 140 aaKnown RBP13.57□□□□□ -0.24
SQLE-201ENST00000265896 PGPA6NDG6 321 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 SLC25A5P05141 298 aaKnown RBP13.56□□□□□ -0.24
SQLE-201ENST00000265896 FAM87AP0C7U9 286 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 Q0VG73 95 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 SPATA12Q7Z6I5 190 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 C20orf144Q9BQM9 153 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 CGB1A6NKQ9 187 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 M0R2Z0 102 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 ERHP84090 104 aaKnown RBP13.56□□□□□ -0.24
SQLE-201ENST00000265896 TMEM200BQ69YZ2 307 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 UNQ5815/PRO19632Q6UWF5 114 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 ZNF788Q6ZQV5 615 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 C1orf174Q8IYL3 243 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 SIAH2O43255 324 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 CSN3P07498 182 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 CR1LQ2VPA4 569 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 CORO2AQ92828 525 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 PGLYRP4Q96LB8 373 aa13.56□□□□□ -0.24
SQLE-201ENST00000265896 H0YJW9 148 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 CD40P25942 277 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 HNRNPA3P51991 378 aaKnown RBP13.55□□□□□ -0.24
SQLE-201ENST00000265896 ASCL3Q9NQ33 180 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 OSTCQ9NRP0 149 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 ZNF835Q9Y2P0 537 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 TIMM23BQ5SRD1 257 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 EBLN2Q6P2I7 272 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 RNF2Q99496 336 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 TPPP3Q9BW30 176 aa13.55□□□□□ -0.24
SQLE-201ENST00000265896 PEX7O00628 323 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 APOA2P02652 100 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 MUC6Q6W4X9 2439 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 UBE2G1P62253 170 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 NDUFA4L2Q9NRX3 87 aa13.54□□□□□ -0.24
SQLE-201ENST00000265896 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
SQLE-201ENST00000265896 MUC21A0A0G2JKD1 596 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 MUC21A0A140T8X8 626 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 hADV38S2A0JD32 116 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 MUC21Q5SSG8 566 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 OR1L8Q8NGR8 309 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 OR8B2Q96RD0 313 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 A0A1W2PPI3 338 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 SMIM27A0A1W2PRY6 76 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 C22orf46C9J442 243 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 C2orf83Q53S99 150 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 WDR73Q6P4I2 378 aa13.53□□□□□ -0.24
SQLE-201ENST00000265896 ZADH2Q8N4Q0 377 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms