RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SRSF7Q16629 238 aaKnown RBP eCLIP13.39□□□□□ -0.27
GPC1-201ENST00000264039 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 LINC00305Q7Z4B0 112 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 HARBI1Q96MB7 349 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 PINLYPA6NC86 204 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 MMP23AO75900 390 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 AZU1P20160 251 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 SLC35E4Q6ICL7 350 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 CFHR5Q9BXR6 569 aa13.39□□□□□ -0.27
GPC1-201ENST00000264039 IGHV3-72A0A0B4J1Y9 119 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 NDUFS8O00217 210 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 GOLT1AQ6ZVE7 132 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 DNPH1O43598 174 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 RBP4P02753 201 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 MPV17P39210 176 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
GPC1-201ENST00000264039 TIMM23BQ5SRD1 257 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 SPEM1Q8N4L4 309 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 KLF14Q8TD94 323 aaPredicted RBP13.38□□□□□ -0.27
GPC1-201ENST00000264039 ZNF257Q9Y2Q1 563 aa13.38□□□□□ -0.27
GPC1-201ENST00000264039 K7EQM0 130 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 MOGAT3Q86VF5 341 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 OR4F17Q8NGA8 305 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 COQ2Q96H96 371 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 CLUHP3Q96NS8 147 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 IGLV3-12A0A075B6K2 115 aa13.37□□□□□ -0.27
GPC1-201ENST00000264039 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
GPC1-201ENST00000264039 RPP21Q9H633 154 aaKnown RBP13.37□□□□□ -0.27
GPC1-201ENST00000264039 RIF1Q5UIP0 2472 aaKnown RBP13.37□□□□□ -0.27
GPC1-201ENST00000264039 FRYLO94915 3013 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 KLK10O43240 276 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 SMIM13P0DJ93 91 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 RNPS1Q15287 305 aaKnown RBP13.36□□□□□ -0.27
GPC1-201ENST00000264039 OR10X1Q8NGY0 326 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 CHD9Q3L8U1 2897 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 TMEM131Q92545 1883 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 TNRC6AQ8NDV7 1962 aaKnown RBP13.36□□□□□ -0.27
GPC1-201ENST00000264039 H0YJW9 148 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 SAMD5Q5TGI4 173 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
GPC1-201ENST00000264039 CHRNA10Q9GZZ6 450 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 ZNRD1Q9P1U0 126 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 KLF13Q9Y2Y9 288 aaPredicted RBP13.36□□□□□ -0.27
GPC1-201ENST00000264039 CXCL12P48061 93 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
GPC1-201ENST00000264039 WDR86Q86TI4 376 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 FAM169BQ8N8A8 192 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 C5orf30Q96GV9 206 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 RABAC1Q9UI14 185 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 PRNDQ9UKY0 176 aa13.36□□□□□ -0.27
GPC1-201ENST00000264039 TMEM265A0A087WTH1 108 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 PSG3Q16557 428 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 MORN2Q502X0 79 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 CIARTQ8N365 385 aaPredicted RBP13.35□□□□□ -0.27
GPC1-201ENST00000264039 UBE2ZQ9H832 354 aaPredicted RBP13.35□□□□□ -0.27
GPC1-201ENST00000264039 TEX48A0A1B0GUV7 120 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 TGFAP01135 160 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 SPATA12Q7Z6I5 190 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 VSTM2AQ8TAG5 236 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 CXXC4Q9H2H0 198 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 HCFC1P51610 2035 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 NBEAP1P0C6P0 100 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 SEC11AP67812 179 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 FAM222BQ8WU58 562 aa13.35□□□□□ -0.27
GPC1-201ENST00000264039 A0A1B0GWB2 263 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 C2orf70A6NJV1 201 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 SLC25A17O43808 307 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 CKS1BP61024 79 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 RIGQ13278 110 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 MORN5Q5VZ52 161 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 SLC25A33Q9BSK2 321 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 COL25A1Q9BXS0 654 aaPredicted RBP13.34□□□□□ -0.27
GPC1-201ENST00000264039 NCOR1P1Q9H4R4 102 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 LOC107984156A0A0G2JMH3 177 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 PET117Q6UWS5 81 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 ARL17AQ8IVW1 177 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 PROK2Q9HC23 129 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 K7ERJ3 54 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 ACP1P24666 158 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 ACP7Q6ZNF0 438 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 IMMP1LQ96LU5 166 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 GPR82Q96P67 336 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 CALYQ9NYX4 217 aa13.34□□□□□ -0.27
GPC1-201ENST00000264039 H3BVH4 76 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 IGLC1P0CG04 106 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 INO80CQ6PI98 192 aaPredicted RBP13.33□□□□□ -0.28
GPC1-201ENST00000264039 TRBV6-6A0A0A6YYG2 114 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 SMIM27A0A1W2PRY6 76 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 GDF5OSQ5U4N7 250 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 MBNL3Q9NUK0 354 aaKnown RBP13.33□□□□□ -0.28
GPC1-201ENST00000264039 PILRBQ9UKJ0 227 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 RBPMS2Q6ZRY4 209 aaKnown RBP13.33□□□□□ -0.28
GPC1-201ENST00000264039 COLCA1Q6ZS62 124 aa13.33□□□□□ -0.28
GPC1-201ENST00000264039 BCL6BQ8N143 479 aaPredicted RBP13.33□□□□□ -0.28
GPC1-201ENST00000264039 SAA2-SAA4A0A096LPE2 208 aa13.32□□□□□ -0.28
GPC1-201ENST00000264039 C15orf61A6NNL5 157 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms