RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 NXT2Q9NPJ8 142 aaKnown RBP6.78□□□□□ -1.32
PTPN3-201ENST00000262539 IGF2RP11717 2491 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 TRAV9-1A0A075B6T8 112 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 GATA3P23771 443 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 CYP2G1PQ6ZSU1 146 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 OR5AN1Q8NGI8 311 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 WNT10AQ9GZT5 417 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 PAX2Q02962 417 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 H0YL77 283 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 IGKV1-5P01602 117 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 RBKSQ9H477 322 aa6.78□□□□□ -1.32
PTPN3-201ENST00000262539 SPTBN1Q01082 2364 aaKnown RBP6.78□□□□□ -1.32
PTPN3-201ENST00000262539 ZNF672Q499Z4 452 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-201ENST00000262539 WFIKKN1Q96NZ8 548 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 AGMATQ9BSE5 352 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 TBL2Q9Y4P3 447 aaKnown RBP6.77□□□□□ -1.33
PTPN3-201ENST00000262539 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 DNAL4O96015 105 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 THBDP07204 575 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 ZNRF1Q8ND25 227 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 ATG2AQ2TAZ0 1938 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 IGKV3D-20A0A0C4DH25 116 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 TRGV4A0A0C4DH28 118 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 LOC107984156A0A0G2JMH3 177 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 AP4M1O00189 453 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 FHITP49789 147 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 ARL17AQ8IVW1 177 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 OR5AU1Q8NGC0 362 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 KIR2DL4Q99706 377 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 KLF2Q9Y5W3 355 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-201ENST00000262539 LY96Q9Y6Y9 160 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 A0A087WWC5 75 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 TRGC1P0CF51 173 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
PTPN3-201ENST00000262539 RNF144BQ7Z419 303 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 IGHV3-48P01763 117 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 MFAP2P55001 183 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 BSXQ3C1V8 233 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 SAMD13Q5VXD3 122 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 Q8NA96 180 aa6.77□□□□□ -1.33
PTPN3-201ENST00000262539 C17orf98A8MV24 154 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 CD5P06127 495 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 RPS20P60866 119 aaKnown RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 TMEM242Q9NWH2 141 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 MPDZO75970 2070 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 A6NDN8 102 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 IL4P05112 153 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 GPR183P32249 361 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 ARPC1AQ92747 370 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 C11orf68Q9H3H3 251 aaKnown RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 BEX4Q9NWD9 120 aaPredicted RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 H7C1H1 209 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 SRD5A1P18405 259 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 Q71RC1 249 aaPredicted RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 VKORC1L1Q8N0U8 176 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 LYPD6BQ8NI32 183 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 FGF23Q9GZV9 251 aaPredicted RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 M0R143 59 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 CA2P00918 260 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 ZNF383Q8NA42 475 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 SH3BGRL3Q9H299 93 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 ASIPP42127 132 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 GLMPQ8WWB7 406 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 RPL35AP18077 110 aaKnown RBP6.76□□□□□ -1.33
PTPN3-201ENST00000262539 REC114Q7Z4M0 266 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 OR10D4PQ8NGN7 298 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 ABCA4P78363 2273 aa6.76□□□□□ -1.33
PTPN3-201ENST00000262539 MT-ND6P03923 174 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 CRIM1Q9NZV1 1036 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 FER1L5A0AVI2 2057 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SLC25A16P16260 332 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 JOSD1Q15040 202 aaPredicted RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 MOSP00540 346 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SRSF6Q13247 344 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RCC1LQ96I51 464 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SDF2L1Q9HCN8 221 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SAA2-SAA4A0A096LPE2 208 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 TRAV40A0A0B4J280 105 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 EREGO14944 169 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SAA2P0DJI9 122 aaPredicted RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 OR1P1Q8NH06 330 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 FBXL15Q9H469 300 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RPRMQ9NS64 109 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SHANK1Q9Y566 2161 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RBMY1BA6NDE4 496 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RBMY1EA6NEQ0 496 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 M0R381 172 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RBMY1DP0C7P1 496 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RBMY1A1P0DJD3 496 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 RBMY1CP0DJD4 496 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 LEPP41159 167 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 SRSF12Q8WXF0 261 aaKnown RBP6.75□□□□□ -1.33
PTPN3-201ENST00000262539 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
PTPN3-201ENST00000262539 IGHV3OR16-8A0A075B7F1 116 aa6.74□□□□□ -1.33
PTPN3-201ENST00000262539 A0A1W2PRE2 83 aa6.74□□□□□ -1.33
PTPN3-201ENST00000262539 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms