RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 PRR20DP86480 221 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 PRR20BP86481 221 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 PRR20AP86496 221 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 C17orf58Q2M2W7 97 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 OR4B1Q8NGF8 309 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 NUDT11Q96G61 164 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 WASHC3Q9Y3C0 194 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 AMMECR1Q9Y4X0 333 aaPredicted RBP10.55□□□□□ -0.72
SNX1-201ENST00000261889 MDS2Q8NDY4 140 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 OR1B1Q8NGR6 318 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 H1FXQ92522 213 aaKnown RBP10.55□□□□□ -0.72
SNX1-201ENST00000261889 MRPL20Q9BYC9 149 aaKnown RBP10.55□□□□□ -0.72
SNX1-201ENST00000261889 SLC45A2Q9UMX9 530 aa10.55□□□□□ -0.72
SNX1-201ENST00000261889 PIGBOS1A0A0B4J2F0 54 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 M0QZK8 103 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 ENSAO43768 121 aaKnown RBP10.54□□□□□ -0.72
SNX1-201ENST00000261889 AMY1AP04745 511 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 OR5B3Q8NH48 314 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 FNDC4Q9H6D8 234 aaPredicted RBP10.54□□□□□ -0.72
SNX1-201ENST00000261889 ASCL3Q9NQ33 180 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 TEX50A0A1B0GTY4 177 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 MT-CO2P00403 227 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 ADH4P08319 380 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 Q6ZT83 130 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 SPAARA0A1B0GVQ0 90 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 HARBI1Q96MB7 349 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 GNB1LQ9BYB4 327 aa10.54□□□□□ -0.72
SNX1-201ENST00000261889 FAM181BA6NEQ2 426 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 COX7A2P2O60397 106 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 PRRX1P54821 245 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 TEX45Q8NA69 505 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 TMSB15BA0A087X1C1 80 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 OR2T8A6NH00 312 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 MPDU1O75352 247 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 CT45A6P0DMU7 189 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 CT45A5P0DMU8 189 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 CT45A7P0DMV0 189 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 AREGP15514 252 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 UQCRFS1P47985 274 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 Q0VG73 95 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 SLC25A2Q9BXI2 301 aa10.53□□□□□ -0.72
SNX1-201ENST00000261889 A0A087X0K7 114 aa10.52□□□□□ -0.72
SNX1-201ENST00000261889 SLC25A5P05141 298 aaKnown RBP10.52□□□□□ -0.72
SNX1-201ENST00000261889 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.72
SNX1-201ENST00000261889 TNFRSF19Q9NS68 423 aa10.52□□□□□ -0.72
SNX1-201ENST00000261889 ZNF835Q9Y2P0 537 aa10.52□□□□□ -0.72
SNX1-201ENST00000261889 MGST3O14880 152 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 NUDT3O95989 172 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 OR4C5Q8NGB2 326 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 SLC25A33Q9BSK2 321 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 IGF2RP11717 2491 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 FAM87AP0C7U9 286 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 TMEM14BQ9NUH8 114 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 CBY1Q9Y3M2 126 aa10.52□□□□□ -0.73
SNX1-201ENST00000261889 PGPA6NDG6 321 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 SLC25A17O43808 307 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 IGKV3-15P01624 115 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 PATE2Q6UY27 113 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 DDB2Q92466 427 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 JPT1Q9UK76 154 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 LOC105371242A0A075B767 164 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 IGHV3OR16-8A0A075B7F1 116 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 SRRM5B3KS81 715 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 C8orf88P0DMB2 117 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 CNTFRP26992 372 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 CIARTQ8N365 385 aaPredicted RBP10.51□□□□□ -0.73
SNX1-201ENST00000261889 RBMXL3Q8N7X1 1067 aaKnown RBP10.51□□□□□ -0.73
SNX1-201ENST00000261889 URB1-AS1Q96HZ7 61 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 C9JCJ5 164 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 WT1-ASQ06250 92 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 INO80CQ6PI98 192 aaPredicted RBP10.51□□□□□ -0.73
SNX1-201ENST00000261889 LINC00305Q7Z4B0 112 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 IGF2BP2-AS1Q96M15 143 aa10.51□□□□□ -0.73
SNX1-201ENST00000261889 SPG11Q96JI7 2443 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 OR4C46A6NHA9 309 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 PSG1P11464 419 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 TM4SF20Q53R12 229 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 LDLRAD2Q5SZI1 272 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 C11orf52Q96A22 123 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 FAM167A-AS1Q96KT0 104 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 ALKBH7Q9BT30 221 aaPredicted RBP10.5□□□□□ -0.73
SNX1-201ENST00000261889 LOC389332A0A1B0GUA5 103 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 RNASE2P10153 161 aaKnown RBP10.5□□□□□ -0.73
SNX1-201ENST00000261889 PPOXP50336 477 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 UBE2G1P62253 170 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 MUC15Q8N387 334 aa10.5□□□□□ -0.73
SNX1-201ENST00000261889 RELQ04864 619 aaPredicted RBP10.49□□□□□ -0.73
SNX1-201ENST00000261889 OR8B3Q8NGG8 313 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 ZNF596Q8TC21 504 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 CCL17Q92583 94 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 TMEM167BQ9NRX6 74 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 KBTBD11-OT1A0A1B0GTJ5 212 aa10.49□□□□□ -0.73
SNX1-201ENST00000261889 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms