RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
GYPC-201ENST00000259254 HSD17B11Q8NBQ5 300 aa12.1□□□□□ -0.47
GYPC-201ENST00000259254 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
GYPC-201ENST00000259254 WDR61Q9GZS3 305 aaKnown RBP12.1□□□□□ -0.47
GYPC-201ENST00000259254 GNB4Q9HAV0 340 aa12.1□□□□□ -0.47
GYPC-201ENST00000259254 CYTL1Q9NRR1 136 aa12.1□□□□□ -0.47
GYPC-201ENST00000259254 GAR1Q9NY12 217 aaKnown RBP12.1□□□□□ -0.47
GYPC-201ENST00000259254 OR2T8A6NH00 312 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 NUDT19A8MXV4 375 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 OR10J1P30954 320 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 TCTEX1D4Q5JR98 221 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 HIST2H2BDQ6DRA6 164 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 WIPF2Q8TF74 440 aaPredicted RBP12.09□□□□□ -0.47
GYPC-201ENST00000259254 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 CCDC140Q96MF4 163 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 TXN2Q99757 166 aa12.09□□□□□ -0.47
GYPC-201ENST00000259254 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 NUPL2O15504 423 aaKnown RBP12.08□□□□□ -0.48
GYPC-201ENST00000259254 CLEC3BP05452 202 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 TPT1P13693 172 aaKnown RBP12.08□□□□□ -0.48
GYPC-201ENST00000259254 CAMLGP49069 296 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 KIAA0141Q14154 515 aaPredicted RBP12.08□□□□□ -0.48
GYPC-201ENST00000259254 TIGITQ495A1 244 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 SLC51BQ86UW2 128 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 THAP8Q8NA92 274 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
GYPC-201ENST00000259254 A0A1W2PRX2 142 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 C17orf112F2Z3M2 114 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 F8W735 103 aaPredicted RBP12.07□□□□□ -0.48
GYPC-201ENST00000259254 MPDU1O75352 247 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 FABP1P07148 127 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 LGALS1P09382 135 aaKnown RBP12.07□□□□□ -0.48
GYPC-201ENST00000259254 IGLC1P0CG04 106 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 ARL3P36405 182 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 RUNX1Q01196 453 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 AWAT1Q58HT5 328 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 ZNF343Q6P1L6 599 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 C3orf56Q8N813 242 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 MGST2Q99735 147 aa12.07□□□□□ -0.48
GYPC-201ENST00000259254 CITED2Q99967 270 aaPredicted RBP12.07□□□□□ -0.48
GYPC-201ENST00000259254 PARD6GQ9BYG4 376 aaPredicted RBP12.07□□□□□ -0.48
GYPC-201ENST00000259254 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 PPP5D1E7EU14 171 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 AGPAT2O15120 278 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 TGOLN2O43493 480 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 FCGR2BP31994 310 aaPredicted RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 FAM209BQ5JX69 171 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 CYP2G1PQ6ZSU1 146 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 KLHL30-AS1Q8NEE0 82 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 GNPNAT1Q96EK6 184 aaPredicted RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 ATP6V0BQ99437 205 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 TRGV9Q99603 122 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 RSG1Q9BU20 258 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 KCNIP2Q9NS61 270 aa12.06□□□□□ -0.48
GYPC-201ENST00000259254 PEF1Q9UBV8 284 aaKnown RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 LSM4Q9Y4Z0 139 aaKnown RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 TSSC4Q9Y5U2 329 aaPredicted RBP12.06□□□□□ -0.48
GYPC-201ENST00000259254 IGKV1D-37A0A075B6S9 117 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 ATP6V0CP27449 155 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 ZNF90Q03938 601 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 SPSB3Q6PJ21 355 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 C4orf3Q8WVX3 66 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 WFDC12Q8WWY7 111 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 ST8SIA2Q92186 375 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 CHRDL1Q9BU40 450 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 GGTLC1Q9BX51 225 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
GYPC-201ENST00000259254 IGHV3-35A0A0C4DH35 117 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 IGKV1-17P01599 117 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 CTSGP08311 255 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
GYPC-201ENST00000259254 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 SELENOTP62341 195 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 ZNF616Q08AN1 781 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 MIC13Q5XKP0 118 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 BPIFCQ8NFQ6 507 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 Q8WTZ3 238 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 SLC25A32Q9H2D1 315 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 SLC45A2Q9UMX9 530 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
GYPC-201ENST00000259254 GGCTO75223 188 aaKnown RBP12.03□□□□□ -0.48
GYPC-201ENST00000259254 YIF1AO95070 293 aa12.03□□□□□ -0.48
GYPC-201ENST00000259254 GATA2P23769 480 aaPredicted RBP12.03□□□□□ -0.48
GYPC-201ENST00000259254 ADMP35318 185 aa12.03□□□□□ -0.48
GYPC-201ENST00000259254 YPEL3P61236 119 aaPredicted RBP12.03□□□□□ -0.48
GYPC-201ENST00000259254 RELQ04864 619 aaPredicted RBP12.03□□□□□ -0.48
GYPC-201ENST00000259254 NSUN5P1Q3KNT7 163 aa12.03□□□□□ -0.48
GYPC-201ENST00000259254 EIF5AL1Q6IS14 154 aaKnown RBP12.03□□□□□ -0.48
GYPC-201ENST00000259254 ZNF600Q6ZNG1 722 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms